Strain Fitness in Shewanella oneidensis MR-1 around SO2909

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
3,037,326	+				-0.9
3,037,344	-				-3.1
3,037,373	-				+0.2
3,037,373	-				+1.7
3,037,411	-				+0.1
3,037,664	+		SO_2908	0.20	-0.4
3,037,664	+		SO_2908	0.20	-1.4
3,037,665	-		SO_2908	0.20	-2.3
3,037,672	-		SO_2908	0.22	-1.3
3,037,672	-		SO_2908	0.22	+1.6
3,037,672	-		SO_2908	0.22	-0.1
3,037,672	-		SO_2908	0.22	-1.1
3,037,672	-		SO_2908	0.22	+0.5
3,037,672	-		SO_2908	0.22	-0.2
3,037,672	-		SO_2908	0.22	+1.7
3,037,672	-		SO_2908	0.22	+1.1
3,037,672	-		SO_2908	0.22	-0.4
3,037,672	-		SO_2908	0.22	-0.2
3,037,760	+		SO_2908	0.37	-0.4
3,037,768	-		SO_2908	0.39	+1.2
3,037,806	+		SO_2908	0.45	-0.3
3,037,811	+		SO_2908	0.46	-2.4
3,037,867	-		SO_2908	0.56	-2.8
3,038,008	-		SO_2908	0.81	-0.7
3,038,051	+		SO_2908	0.89	-2.7
3,038,058	+				-1.7
3,038,176	-				-0.5
3,039,206	-				-1.3
3,039,325	+				-0.1
3,039,391	+		SO_2910	0.19	+2.1
3,039,435	+		SO_2910	0.28	+1.2
3,039,443	-		SO_2910	0.29	+0.2
3,039,446	+		SO_2910	0.30	+0.3
3,039,464	-		SO_2910	0.34	-0.7
3,039,464	-		SO_2910	0.34	+0.6
3,039,469	-		SO_2910	0.35	+0.8
3,039,543	-		SO_2910	0.50	-1.3
3,039,569	-		SO_2910	0.55	-1.2
3,039,601	+		SO_2910	0.62	+1.3
3,039,609	-		SO_2910	0.64	-1.3
3,039,656	-		SO_2910	0.73	-1.9
3,039,665	+		SO_2910	0.75	-0.6
3,039,805	+				-1.6
3,039,900	+				+0.5
3,039,900	-				-2.5
3,039,919	+				-2.8
3,039,930	+				-1.4
3,039,945	-				+0.9