Strain Fitness in Shewanella oneidensis MR-1 around SO2821

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
2,941,199	+				+1.9
2,941,325	-		SO_2820	0.35	+0.1
2,941,332	-		SO_2820	0.36	-0.4
2,941,351	-		SO_2820	0.40	+0.8
2,941,430	+		SO_2820	0.57	+1.8
2,941,430	+		SO_2820	0.57	-1.4
2,941,550	-		SO_2820	0.83	+1.9
2,941,597	+				-0.8
2,942,079	-				+0.1
2,942,091	+				+0.1
2,942,174	+		SO2821	0.38	+2.1
2,942,232	+		SO2821	0.61	-1.1
2,942,239	-		SO2821	0.64	+0.6
2,942,376	+				+0.1
2,942,463	-				+1.1
2,942,685	-		SO2822	0.13	-1.7
2,942,685	-		SO2822	0.13	-2.1
2,942,742	-		SO2822	0.17	+1.1
2,942,847	+		SO2822	0.23	+0.7
2,942,913	-		SO2822	0.27	+1.8
2,943,023	-		SO2822	0.34	-0.6
2,943,057	+		SO2822	0.36	-1.7
2,943,104	+		SO2822	0.38	+0.7
2,943,110	-		SO2822	0.39	+1.1
2,943,152	-		SO2822	0.41	+0.9
2,943,187	-		SO2822	0.43	+3.4
2,943,214	-		SO2822	0.45	-0.3
2,943,221	-		SO2822	0.45	+0.5
2,943,281	+		SO2822	0.49	+0.1