Strain Fitness in Shewanella oneidensis MR-1 around SO2767

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
2,888,623	+		SO2766	0.86	+0.9
2,888,661	+		SO2766	0.88	-2.3
2,888,893	+				+0.8
2,888,966	+				+0.1
2,889,302	+				+1.0
2,889,526	-	asnB-1	SO2767	0.12	+2.3
2,889,790	-	asnB-1	SO2767	0.28	+0.2
2,889,821	+	asnB-1	SO2767	0.30	-0.7
2,889,829	-	asnB-1	SO2767	0.31	+0.6
2,890,009	+	asnB-1	SO2767	0.42	-0.7
2,890,009	+	asnB-1	SO2767	0.42	-0.3
2,890,019	-	asnB-1	SO2767	0.42	+1.8
2,890,124	-	asnB-1	SO2767	0.48	+0.8
2,890,124	-	asnB-1	SO2767	0.48	+0.6
2,890,353	-	asnB-1	SO2767	0.62	+0.1
2,890,683	+	asnB-1	SO2767	0.82	-1.9
2,890,829	+				-0.7
2,891,004	-				+0.9
2,891,118	+				-1.6
2,891,125	+				+2.3
2,891,125	+				+2.8
2,891,126	-				+1.1
2,891,143	-				-0.0
2,891,274	+		SO2768	0.12	-1.6
2,891,282	-		SO2768	0.13	-2.8
2,891,378	+		SO2768	0.18	+1.1
2,891,442	+		SO2768	0.22	-1.9
2,891,450	-		SO2768	0.22	+0.9
2,891,450	-		SO2768	0.22	+1.1
2,891,450	-		SO2768	0.22	-2.2
2,891,492	-				-0.2
2,891,492	-		SO2768	0.24	-1.6
2,891,492	-		SO2768	0.24	-2.6
2,891,647	+		SO2768	0.33	-0.1
2,891,674	-		SO2768	0.35	-0.0
2,891,740	+		SO2768	0.38	+1.2
2,891,755	+		SO2768	0.39	+1.1
2,891,763	-		SO2768	0.39	-2.6
2,891,814	+		SO2768	0.42	+0.1
2,891,878	+		SO2768	0.46	+0.6
2,891,878	+		SO2768	0.46	-1.5
2,891,942	-		SO2768	0.49	+0.3
2,891,952	-		SO2768	0.50	-0.2