Strain Fitness in Shewanella oneidensis MR-1 around SO2676

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
2,799,980	+		SO2673	0.37	-1.3
2,800,200	-		SO2673	0.73	+0.1
2,800,204	+		SO2673	0.74	+0.6
2,800,204	+		SO2673	0.74	+0.6
2,800,276	+		SO2673	0.86	-0.1
2,800,284	-		SO2673	0.87	-2.7
2,800,323	+				-2.2
2,800,372	+				-0.3
2,800,609	+		SO2675	0.11	+1.2
2,800,653	+		SO2675	0.25	+1.1
2,800,664	+		SO2675	0.29	+1.9
2,800,675	+		SO2675	0.33	+1.3
2,800,683	-		SO2675	0.35	-1.1
2,800,723	+		SO2675	0.49	-0.5
2,800,723	+		SO2675	0.49	-0.4
2,800,725	+		SO2675	0.49	+0.9
2,800,725	+		SO2675	0.49	-1.2
2,800,825	+		SO2675	0.82	-2.2
2,800,825	+		SO2675	0.82	+1.1
2,800,833	-		SO2675	0.85	+1.4
2,800,914	+				+0.5
2,800,922	-		SO2676	0.12	+1.0
2,801,118	+		SO2676	0.79	-0.7
2,801,136	+		SO2676	0.86	-0.7
2,801,136	+		SO2676	0.86	-1.6
2,801,144	-		SO2676	0.88	-2.4
2,801,144	-		SO2676	0.88	-0.3
2,801,171	+				+1.3
2,801,179	-				-1.6
2,801,432	+		SO2677	0.42	-0.1
2,801,432	+		SO2677	0.42	-0.5
2,801,472	-		SO2677	0.49	+1.1
2,801,501	+		SO2677	0.54	-0.1
2,801,526	-		SO2677	0.58	-1.4
2,801,839	+		SO2678	0.36	-0.1
2,801,855	+		SO2678	0.45	+0.9
2,801,924	+		SO2678	0.80	+0.9
2,802,003	-				+1.0
2,802,012	+				-0.4
2,802,068	-				-0.1
2,802,072	+				+1.1
2,802,080	-				+2.1
2,802,122	-		SO2679	0.10	-1.6
2,802,122	-		SO2679	0.10	+1.5