Strain Fitness in Shewanella oneidensis MR-1 around SO2618

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
2,752,526	-	dcd	SO2616	0.60	+3.9
2,753,076	-	udk	SO2617	0.45	+0.7
2,753,143	+	udk	SO2617	0.56	+5.6
2,753,194	-	udk	SO2617	0.64	+0.6
2,753,221	-	udk	SO2617	0.68	+2.1
2,753,436	-				-0.2
2,753,623	-		SO2618	0.17	+1.0
2,753,623	-		SO2618	0.17	+0.7
2,753,744	-		SO2618	0.28	+2.3
2,753,907	-		SO2618	0.42	+1.8
2,753,984	-		SO2618	0.49	+2.0
2,754,065	+		SO2618	0.56	+5.9
2,754,157	+		SO2618	0.65	+5.2
2,754,448	+				+5.9
2,754,456	-				+2.3
2,754,456	-				+3.6
2,754,462	-				+3.3
2,754,501	-				+3.2
2,754,501	-				+2.8