Strain Fitness in Shewanella oneidensis MR-1 around SO2588

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
2,714,511	-	hemB-1	SO2587	0.72	+0.2
2,714,673	+	hemB-1	SO2587	0.88	+1.2
2,714,673	+	hemB-1	SO2587	0.88	-0.3
2,714,746	+				-0.4
2,714,801	+				-0.6
2,714,852	-				+1.2
2,715,549	+				+0.3
2,715,794	-		SO2588	0.32	-0.3
2,715,815	+		SO2588	0.34	-1.0
2,715,968	+		SO2588	0.51	-1.8
2,715,968	+		SO2588	0.51	+0.2
2,715,976	-		SO2588	0.52	-1.1
2,715,976	-		SO2588	0.52	-2.2
2,716,056	-		SO2588	0.60	+0.1
2,716,097	-		SO2588	0.65	-0.6
2,716,097	-		SO2588	0.65	+0.1
2,716,319	-		SO2588	0.90	-0.3
2,716,455	-				-0.0
2,716,455	-				+0.5
2,716,570	+				+4.8
2,716,624	+				-1.3
2,716,624	+				-1.8
2,716,649	-				+0.2
2,716,661	-				+1.2
2,716,661	-				+0.7
2,716,661	-				+0.6
2,716,690	-				-1.4
2,716,843	+				+1.9
2,716,885	-		SO2589	0.11	-2.2
2,716,914	+		SO2589	0.15	-1.6
2,716,914	+		SO2589	0.15	-2.6
2,716,914	+		SO2589	0.15	+0.2
2,716,914	+		SO2589	0.15	-0.7
2,716,922	-		SO2589	0.15	+1.7
2,716,922	-		SO2589	0.15	-2.2
2,716,922	-		SO2589	0.15	-0.0
2,717,035	+		SO2589	0.29	+0.8
2,717,041	-		SO2589	0.30	-0.3
2,717,052	+		SO2589	0.31	+0.2
2,717,107	-		SO2589	0.38	+2.6
2,717,253	+		SO2589	0.55	+0.0
2,717,261	-		SO2589	0.56	-0.0
2,717,345	-		SO2589	0.66	-2.0