Strain Fitness in Shewanella oneidensis MR-1 around SO2564

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
2,692,579	-		SO2563	0.10	+0.1
2,692,662	+		SO2563	0.20	-2.3
2,692,664	+		SO2563	0.21	-1.6
2,692,665	+		SO2563	0.21	-1.8
2,692,723	+		SO2563	0.28	-1.6
2,692,837	-		SO2563	0.42	+0.5
2,692,853	-		SO2563	0.44	+1.0
2,692,965	-		SO2563	0.58	+0.7
2,692,981	-		SO2563	0.60	-3.1
2,693,010	+		SO2563	0.64	+0.0
2,693,082	+		SO2563	0.73	-2.9
2,693,198	+		SO2563	0.87	-2.5
2,693,210	+		SO2563	0.89	+1.2
2,693,210	+		SO2563	0.89	+0.0
2,693,210	+		SO2563	0.89	-1.9
2,693,210	+		SO2563	0.89	-0.5
2,693,246	+				-0.9
2,693,273	+				-2.5
2,693,593	+				-3.4
2,693,593	+				-2.9
2,693,593	+				-1.8
2,693,601	-				-2.2
2,693,601	-				-1.6
2,693,657	-				-1.8
2,693,813	-		SO2564	0.17	-4.6
2,693,843	+		SO2564	0.19	-3.5
2,693,982	+		SO2564	0.28	-1.4
2,693,992	-		SO2564	0.28	-2.4
2,694,063	+		SO2564	0.33	-2.3
2,694,414	-		SO2564	0.56	-3.6
2,694,414	-		SO2564	0.56	-0.6
2,694,432	-		SO2564	0.57	-1.2
2,694,456	+		SO2564	0.58	-2.4
2,694,691	+		SO2564	0.74	-1.1
2,694,691	+		SO2564	0.74	-2.2
2,694,800	+		SO2564	0.81	-0.9
2,694,925	+		SO2564	0.89	+3.1
2,694,947	+				-1.8
2,695,021	-				-1.4
2,695,023	+				-2.2
2,695,024	+				-1.2
2,695,031	-				-3.2
2,695,168	+				-2.4
2,695,251	+				-0.0
2,695,373	+				-2.2
2,695,444	-				+1.2
2,695,484	+				+0.8
2,695,634	-		SO2565	0.26	-0.5
2,695,697	+		SO2565	0.35	-1.1
2,695,705	-		SO2565	0.37	-0.2
2,695,842	-		SO2565	0.58	-0.7
2,695,911	-		SO2565	0.69	-1.9
2,695,988	-		SO2565	0.80	+0.8
2,696,036	+		SO2565	0.88	-2.5