Strain Fitness in Shewanella oneidensis MR-1 around SO2523

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
2,646,985	+		SO2520	0.84	+1.6
2,647,078	+				+1.2
2,647,154	+				-0.0
2,647,262	+				+0.1
2,647,381	-				+2.3
2,647,488	+				-0.2
2,647,495	+				+0.4
2,647,668	+				+2.1
2,647,747	+				-1.9
2,647,757	+				-1.1
2,647,765	-				-1.1
2,647,816	+				-0.2
2,647,824	-				-0.9
2,647,938	+				-0.1
2,647,946	-				-1.2
2,648,195	+		SO2523	0.10	+0.2
2,648,309	+		SO2523	0.14	-0.3
2,648,335	-		SO2523	0.15	+0.9
2,648,370	+		SO2523	0.16	+0.6
2,648,397	+		SO2523	0.17	+0.8
2,648,461	-		SO2523	0.20	+0.5
2,648,552	+		SO2523	0.23	-1.6
2,648,560	-		SO2523	0.23	+0.3
2,648,597	-		SO2523	0.24	+1.1
2,648,597	-		SO2523	0.24	+0.4
2,648,684	-		SO2523	0.28	-0.5
2,648,744	-		SO2523	0.30	+0.7
2,648,757	+		SO2523	0.30	-2.4
2,648,937	+		SO2523	0.36	-0.9
2,648,947	-		SO2523	0.37	-0.8
2,649,223	-		SO2523	0.47	+0.5
2,649,233	+		SO2523	0.47	-0.7
2,649,233	+		SO2523	0.47	-0.4
2,649,241	-		SO2523	0.47	+0.3
2,649,241	-		SO2523	0.47	-1.1
2,649,315	+		SO2523	0.50	-0.9
2,649,415	-		SO2523	0.53	-1.6
2,649,497	-		SO2523	0.56	-0.3
2,649,664	-		SO2523	0.62	-0.2
2,650,028	-		SO2523	0.75	-1.6
2,650,260	+		SO2523	0.83	-0.1
2,650,326	+		SO2523	0.86	-0.0
2,650,326	+		SO2523	0.86	+0.3
2,650,326	+		SO2523	0.86	-1.5
2,650,326	+		SO2523	0.86	-0.6
2,650,334	-		SO2523	0.86	+2.3
2,650,334	-		SO2523	0.86	-0.6
2,650,334	-		SO2523	0.86	-0.3
2,650,334	-		SO2523	0.86	-0.4
2,650,494	-				+0.3
2,650,628	-				+1.9
2,650,656	-				-1.9
2,650,830	+				-1.5
2,650,838	-				-0.1
2,650,899	-				+0.4
2,650,911	+				-2.4
2,650,913	+				+1.5
2,651,075	+		SO2524	0.16	-1.0
2,651,143	-		SO2524	0.19	-1.8
2,651,452	+		SO2524	0.35	-1.4
2,651,599	+		SO2524	0.42	+1.8
2,651,607	+		SO2524	0.43	-0.1
2,651,607	-		SO2524	0.43	+0.5
2,651,615	-		SO2524	0.43	-0.5
2,651,640	-		SO2524	0.44	-0.0
2,651,726	-		SO2524	0.49	-1.3