Strain Fitness in Shewanella oneidensis MR-1 around SO2373

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
2,476,872	+				+0.3
2,476,893	+				+0.6
2,476,898	+				+0.8
2,476,901	-				-1.5
2,476,906	-				-0.5
2,476,957	+				-1.7
2,477,100	+				+1.0
2,477,137	-				-0.5
2,477,233	-				-1.3
2,477,285	+				+0.4
2,477,295	+				+1.1
2,477,414	-				-0.7
2,477,414	-				-0.3
2,477,696	+				-1.7
2,477,836	-				-1.3
2,477,893	-		SO2373	0.12	+0.8
2,478,031	-		SO2373	0.23	+1.6
2,478,133	+		SO2373	0.31	-1.8
2,478,166	-		SO2373	0.33	+0.7
2,478,191	-		SO2373	0.35	+2.7
2,478,558	+		SO2373	0.64	-0.2
2,478,672	-		SO2373	0.73	+0.5
2,478,721	-		SO2373	0.77	+0.8
2,478,766	+		SO2373	0.81	+1.3
2,478,768	+		SO2373	0.81	+2.2
2,478,768	+		SO2373	0.81	+2.2
2,478,768	+		SO2373	0.81	+0.4
2,478,776	-		SO2373	0.81	-0.8
2,478,801	-		SO2373	0.83	-1.0
2,478,914	-				-0.1
2,478,914	-				-2.5
2,479,039	-				-0.4
2,479,039	-				-0.4
2,479,046	+				+1.4
2,479,123	+				+2.4
2,479,234	-		SO2374	0.12	+0.3
2,479,261	+		SO2374	0.15	+0.3
2,479,374	+		SO2374	0.27	+0.7
2,479,421	+		SO2374	0.32	+1.5
2,479,429	-		SO2374	0.33	-0.9
2,479,429	-		SO2374	0.33	+0.3
2,479,512	+		SO2374	0.43	-0.1
2,479,522	-		SO2374	0.44	-1.9
2,479,533	+		SO2374	0.45	-0.8
2,479,535	-		SO2374	0.45	-0.1
2,479,558	-		SO2374	0.48	-0.6
2,479,566	+		SO2374	0.49	+0.1
2,479,611	+		SO2374	0.53	-1.6
2,479,619	-		SO2374	0.54	+1.2
2,479,695	-		SO2374	0.63	+0.4
2,479,995	-				+1.2