Strain Fitness in Shewanella oneidensis MR-1 around SO2346

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
2,454,065	+				+1.3
2,454,073	-				-0.4
2,454,081	-				+0.5
2,454,096	-				+0.2
2,454,096	-				+0.8
2,454,111	-				+1.1
2,454,289	-		SO2346	0.30	-2.2
2,454,300	+		SO2346	0.31	-0.6
2,454,300	+		SO2346	0.31	+0.3
2,454,308	-		SO2346	0.32	-1.2
2,454,309	+		SO2346	0.32	+0.9
2,454,361	+		SO2346	0.38	+0.9
2,454,369	-		SO2346	0.39	-0.2
2,454,369	-		SO2346	0.39	+0.6
2,454,411	-		SO2346	0.43	+0.9
2,454,591	+		SO2346	0.64	+0.3
2,454,606	+		SO2346	0.66	+2.8
2,454,639	+		SO2346	0.69	-0.8
2,454,639	+		SO2346	0.69	-0.5
2,454,647	-		SO2346	0.70	+2.3
2,454,652	-		SO2346	0.71	-0.1
2,454,657	-		SO2346	0.71	+0.6
2,454,680	+		SO2346	0.74	+0.0
2,454,690	+		SO2346	0.75	+0.8
2,454,719	-		SO2346	0.78	+1.2
2,454,765	+		SO2346	0.84	+0.8
2,454,765	+		SO2346	0.84	-1.3
2,455,062	+				+1.5
2,455,107	+				+3.2
2,455,190	+				-0.5
2,455,340	-	gapA-3	SO2347	0.16	+0.4
2,455,354	+	gapA-3	SO2347	0.17	-0.0
2,455,362	-	gapA-3	SO2347	0.17	-1.0
2,455,400	-	gapA-3	SO2347	0.20	+0.5
2,455,833	+	gapA-3	SO2347	0.50	-1.0
2,455,839	+	gapA-3	SO2347	0.51	-1.6