Strain Fitness in Shewanella oneidensis MR-1 around SO2256
Experiment: Carbenicillin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbenicillin 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,370,468 | + | mfd | SO2255 | 0.75 | +0.5 |
2,370,606 | + | mfd | SO2255 | 0.79 | -0.0 |
2,370,642 | + | mfd | SO2255 | 0.80 | +1.3 |
2,370,704 | + | mfd | SO2255 | 0.82 | +1.0 |
2,370,712 | - | mfd | SO2255 | 0.82 | -0.0 |
2,371,123 | - | +1.1 | |||
2,371,161 | + | -1.5 | |||
2,371,169 | - | -1.3 | |||
2,371,224 | - | -1.2 | |||
2,371,621 | - | SO2256 | 0.31 | -0.5 | |
2,371,629 | - | SO2256 | 0.32 | +0.6 | |
2,371,809 | - | SO2256 | 0.61 | +1.3 | |
2,371,853 | - | SO2256 | 0.68 | +1.4 |
Or see this region's nucleotide sequence