Strain Fitness in Shewanella oneidensis MR-1 around SO1933

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
2,039,289	+	sucC	SO1932	0.68	+2.3
2,040,665	+				-1.0
2,040,665	+				-0.4
2,040,673	-				+1.3
2,040,734	+				-0.5
2,040,734	+				-0.2
2,040,742	-				-1.0
2,040,742	-				+0.7
2,040,806	+				+1.1
2,040,806	+				+0.4
2,040,806	+				+0.8
2,040,877	+				+0.4
2,040,910	-				-2.7
2,040,968	+	rnk	SO1935	0.14	-1.8
2,041,020	+	rnk	SO1935	0.26	+3.2
2,041,335	+				-1.8
2,041,358	-				+1.0
2,041,410	-				-2.4
2,041,511	+		SO1936	0.29	+2.1