Strain Fitness in Shewanella oneidensis MR-1 around SO1736

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
1,817,432	+				+0.7
1,817,432	+				+0.3
1,817,440	-		SO1734	0.10	+1.0
1,817,460	+		SO1734	0.15	+1.6
1,817,470	+		SO1734	0.18	+0.4
1,817,470	+		SO1734	0.18	+0.4
1,817,484	+		SO1734	0.21	-0.5
1,817,484	+		SO1734	0.21	-1.2
1,817,504	-		SO1734	0.26	+1.7
1,817,541	-		SO1734	0.36	-1.0
1,817,614	+		SO1734	0.54	-0.9
1,817,705	+		SO1734	0.77	-2.7
1,817,775	+				+0.0
1,817,782	-				-1.1
1,818,107	+				+0.5
1,818,107	+				+1.1
1,818,118	+				+0.8
1,818,119	-				+1.8
1,818,284	+				+0.4
1,818,285	+				+1.3
1,818,285	+				-0.5
1,818,285	+				-1.7
1,818,285	+				-0.3
1,818,292	-				-1.4
1,818,293	-				-1.3
1,818,293	-				+1.1
1,818,293	-				+0.1
1,818,496	+		SO1736	0.43	+2.0
1,818,514	-		SO1736	0.46	+1.7
1,818,514	-		SO1736	0.46	+0.9
1,818,556	+		SO1736	0.53	-1.8
1,818,556	+		SO1736	0.53	-1.4
1,818,556	+		SO1736	0.53	-2.0
1,818,556	+		SO1736	0.53	-0.0
1,818,564	-		SO1736	0.54	+0.6
1,818,564	-		SO1736	0.54	+0.4
1,818,564	-		SO1736	0.54	+0.8
1,818,564	-		SO1736	0.54	-1.6
1,818,589	+		SO1736	0.58	+0.7
1,818,589	+		SO1736	0.58	-2.6
1,818,658	+		SO1736	0.69	-0.8
1,818,658	+		SO1736	0.69	+1.0
1,818,658	+		SO1736	0.69	-2.0
1,818,658	+		SO1736	0.69	+0.9
1,818,658	+		SO1736	0.69	+1.4
1,818,666	-		SO1736	0.71	-0.0
1,818,918	+		SO1737	0.39	+0.2
1,818,956	-		SO1737	0.72	-1.4
1,818,958	+		SO1737	0.74	-1.4
1,818,958	+		SO1737	0.74	+1.2
1,818,958	+		SO1737	0.74	+1.9
1,818,958	+		SO1737	0.74	-0.9
1,818,958	+		SO1737	0.74	+2.4
1,818,966	-		SO1737	0.80	+0.4
1,818,966	-		SO1737	0.80	+0.4
1,818,966	-		SO1737	0.80	-1.1
1,818,966	-		SO1737	0.80	+0.1
1,818,966	-		SO1737	0.80	-1.2
1,818,966	-		SO1737	0.80	+0.5
1,818,966	-		SO1737	0.80	+0.3
1,818,966	-		SO1737	0.80	-0.7
1,818,968	+		SO1737	0.82	+2.2
1,818,968	+		SO1737	0.82	-2.2
1,818,976	-		SO1737	0.89	-0.2
1,819,097	+				+0.6
1,819,105	-				-0.8
1,819,164	-		SO1738	0.24	-0.4
1,819,678	+				+0.3
1,819,748	-				-0.1
1,819,751	+				-2.5
1,819,759	-				+0.4
1,819,805	+				+0.2