Strain Fitness in Shewanella oneidensis MR-1 around SO1687

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
1,772,739	+		SO1686	0.56	-0.4
1,772,921	+		SO1686	0.65	+1.5
1,773,049	+		SO1686	0.71	-1.0
1,773,157	-		SO1686	0.76	+1.8
1,773,193	-		SO1686	0.78	-1.7
1,773,230	-		SO1686	0.80	+1.1
1,773,237	+		SO1686	0.80	+0.7
1,773,512	-				+0.6
1,773,517	+				+0.7
1,773,517	+				-1.2
1,773,525	-				+1.3
1,773,532	-				+1.6
1,773,532	-				-0.4
1,773,656	+				-0.3
1,773,661	+				-1.3
1,773,777	+		SO1687	0.19	+1.2
1,773,912	+		SO1687	0.54	+2.9
1,773,953	-		SO1687	0.64	+1.8
1,774,000	+		SO1687	0.76	+1.0
1,774,008	-		SO1687	0.78	+0.7
1,774,008	-		SO1687	0.78	-0.0
1,774,010	+		SO1687	0.79	+0.5
1,774,010	+		SO1687	0.79	+1.3
1,774,054	+				+0.9
1,774,054	+				-2.4
1,774,062	-				+0.6
1,774,062	-				+2.3
1,774,069	-				+0.4
1,774,103	+				-2.7
1,774,414	+				-0.6
1,774,491	+				-0.6
1,774,507	-				+0.8
1,774,616	+				-2.4
1,774,616	+				+1.0
1,774,624	-				-0.7
1,774,664	-				+1.7
1,774,878	+		SO1689	0.16	+1.3
1,775,077	+		SO1689	0.25	+0.1