Strain Fitness in Shewanella oneidensis MR-1 around SO1483

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
1,548,284	-				+0.7
1,548,298	+				+1.3
1,548,437	-				-0.4
1,548,722	-				+1.4
1,548,901	-				-2.5
1,549,287	+				-0.4
1,549,287	+				-0.8
1,549,287	+				+0.7
1,549,297	-				+0.7
1,549,320	+				-0.3
1,549,328	-				-1.2
1,549,397	+				+0.7
1,549,410	+				-1.8
1,549,432	-				+1.4
1,549,732	-	aceB	SO1483	0.28	+1.0
1,549,776	+	aceB	SO1483	0.30	+2.2
1,549,788	+	aceB	SO1483	0.31	-2.0
1,549,806	+	aceB	SO1483	0.32	+1.7
1,549,809	-	aceB	SO1483	0.32	-0.3
1,549,858	-	aceB	SO1483	0.35	+0.4
1,550,204	-	aceB	SO1483	0.56	-1.8
1,550,293	+	aceB	SO1483	0.62	+1.5
1,550,867	+				+1.5
1,550,875	-				-1.6
1,550,875	-				-1.8
1,550,992	+				-0.8
1,551,072	+				+1.0
1,551,084	+				+1.0
1,551,152	+				+1.4
1,551,160	+				+0.6
1,551,261	+	aceA	SO1484	0.15	+0.6
1,551,288	-	aceA	SO1484	0.17	-0.5
1,551,479	-	aceA	SO1484	0.32	-1.0
1,551,733	+	aceA	SO1484	0.51	+0.2
1,551,877	-	aceA	SO1484	0.62	-1.2
1,551,887	-	aceA	SO1484	0.63	+0.2
1,551,916	-	aceA	SO1484	0.65	+0.1