Strain Fitness in Shewanella oneidensis MR-1 around SO1404

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
1,458,922	-				+1.6
1,459,021	+		SO1403	0.33	-1.6
1,459,031	-		SO1403	0.34	-0.1
1,459,031	-		SO1403	0.34	-1.1
1,459,105	+		SO1403	0.40	+0.3
1,459,115	+		SO1403	0.40	+1.1
1,459,149	-		SO1403	0.43	+0.1
1,459,273	-		SO1403	0.53	-0.0
1,459,397	-		SO1403	0.63	-2.2
1,459,486	+		SO1403	0.70	+1.0
1,459,487	+		SO1403	0.70	-2.8
1,459,487	+		SO1403	0.70	+0.6
1,459,487	+		SO1403	0.70	+0.5
1,459,495	-		SO1403	0.70	-0.8
1,459,564	-		SO1403	0.76	-0.8
1,459,628	+		SO1403	0.81	+2.6
1,459,653	-		SO1403	0.83	+1.9
1,459,801	+				-1.8
1,459,814	-				+1.1
1,459,971	-		SO1404	0.19	-0.9
1,460,160	+		SO1404	0.68	-0.7
1,460,168	-		SO1404	0.70	-0.2
1,460,208	+		SO1404	0.81	+2.0
1,460,521	-				-0.6
1,460,854	-				-2.2
1,461,068	+				-0.8
1,461,086	-				-1.8
1,461,261	-		SO1405	0.23	-2.1
1,461,261	-		SO1405	0.23	+0.6
1,461,261	-		SO1405	0.23	-1.7
1,461,261	-		SO1405	0.23	-2.1