Strain Fitness in Shewanella oneidensis MR-1 around SO1320

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
1,373,540	+		SO1318	0.31	+1.5
1,373,548	-		SO1318	0.33	-1.9
1,373,568	+		SO1318	0.37	-0.5
1,373,576	-		SO1318	0.39	-2.1
1,373,576	-		SO1318	0.39	-0.8
1,373,576	-		SO1318	0.39	+0.1
1,373,585	+		SO1318	0.40	-0.0
1,373,633	-		SO1318	0.50	-1.3
1,373,844	+				-1.3
1,373,968	-		SO1319	0.14	-0.7
1,373,968	-		SO1319	0.14	+1.5
1,374,010	-		SO1319	0.21	-1.0
1,374,019	+		SO1319	0.22	+0.3
1,374,023	-		SO1319	0.23	+0.8
1,374,023	-		SO1319	0.23	-1.4
1,374,027	-		SO1319	0.24	-2.0
1,374,084	+		SO1319	0.33	-0.2
1,374,202	+		SO1319	0.52	+0.1
1,374,202	+		SO1319	0.52	+0.7
1,374,202	+		SO1319	0.52	+1.7
1,374,205	-		SO1319	0.52	-2.3
1,374,286	-		SO1319	0.65	-1.5
1,374,376	-		SO1319	0.79	+0.7
1,374,381	+		SO1319	0.80	+0.1
1,374,487	+				-0.5
1,374,658	+		SO1320	0.40	-0.8
1,374,669	+		SO1320	0.43	-2.8
1,374,669	+		SO1320	0.43	-0.2
1,374,669	+		SO1320	0.43	+2.1
1,374,677	-		SO1320	0.45	+2.1
1,374,781	+		SO1320	0.72	+1.9
1,374,942	+				-0.4
1,374,953	+				+1.2
1,374,953	+				-0.2
1,374,953	+				-0.5
1,374,953	+				-1.2
1,374,961	-				+0.3
1,374,961	-				+0.9
1,374,961	-				-1.3
1,375,076	-		SO1321	0.14	-0.2
1,375,227	-		SO1321	0.29	-0.4
1,375,284	+		SO1321	0.35	-1.1
1,375,477	-		SO1321	0.55	+1.2
1,375,509	+		SO1321	0.58	+0.6
1,375,509	+		SO1321	0.58	+0.4
1,375,509	+		SO1321	0.58	+1.2
1,375,509	+		SO1321	0.58	-1.0
1,375,545	+		SO1321	0.62	-2.1
1,375,546	-		SO1321	0.62	+0.5
1,375,743	+		SO1321	0.82	+0.3