Strain Fitness in Shewanella oneidensis MR-1 around SO0963

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
996,979	-				+1.6
997,141	-				-2.6
997,164	+				+0.9
997,332	+		SO0962	0.26	+0.3
997,346	+		SO0962	0.29	+0.3
997,346	+		SO0962	0.29	+2.2
997,356	+		SO0962	0.31	-0.1
997,356	+		SO0962	0.31	-0.1
997,356	+		SO0962	0.31	+0.6
997,356	+		SO0962	0.31	-0.1
997,359	-		SO0962	0.31	-1.1
997,364	-		SO0962	0.32	+1.0
997,366	-		SO0962	0.33	-1.5
997,459	-		SO0962	0.50	-0.2
997,486	+		SO0962	0.56	-1.8
997,505	+		SO0962	0.59	+0.5
997,505	+		SO0962	0.59	+0.0
997,513	-		SO0962	0.61	-1.0
997,558	+		SO0962	0.69	+0.0
997,625	+		SO0962	0.82	-1.5
997,686	-				-0.3
997,686	-				+0.1
997,698	+				+2.0
997,706	-				-1.3
997,706	-				-0.8
997,740	-				-0.3
997,754	-				+0.8
997,769	+				+0.6
997,777	-				+0.9
997,793	-				+0.9
997,895	+				+0.5
998,027	+		SO0963	0.41	-1.1
998,034	-		SO0963	0.44	-1.9
998,039	+		SO0963	0.46	-1.4
998,063	+		SO0963	0.57	-0.5
998,071	-		SO0963	0.60	-0.5
998,071	-		SO0963	0.60	-0.4
998,081	+		SO0963	0.65	+0.7
998,123	-		SO0963	0.83	-0.3
998,188	+				+1.2
998,201	-				+0.1
998,201	-				-1.8
998,207	-				+1.0
998,214	-				+1.3
998,244	+				-2.6
998,244	+				-1.3
998,252	-				-2.3
998,273	+				+0.7
998,297	-				+0.4
998,309	+				-1.0
998,356	-		SO0964	0.24	+0.7
998,364	-		SO0964	0.28	-3.5
998,416	+		SO0964	0.53	+0.6
998,474	+		SO0964	0.81	+0.0
998,481	+		SO0964	0.85	+0.1
998,489	-		SO0964	0.88	+1.3