Strain Fitness in Shewanella oneidensis MR-1 around SO_2630

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
2,766,121	+	icd	SO2629	0.72	+1.2
2,766,152	-	icd	SO2629	0.73	-3.1
2,766,173	-	icd	SO2629	0.74	+0.5
2,766,173	-	icd	SO2629	0.74	+1.6
2,766,173	-	icd	SO2629	0.74	-0.9
2,766,215	+	icd	SO2629	0.76	-2.4
2,766,218	-	icd	SO2629	0.76	-0.5
2,766,240	-	icd	SO2629	0.77	+0.1
2,766,339	-	icd	SO2629	0.82	+1.8
2,766,339	-	icd	SO2629	0.82	+3.1
2,766,339	-	icd	SO2629	0.82	-1.0
2,766,339	-	icd	SO2629	0.82	-1.6
2,766,345	-	icd	SO2629	0.82	+0.5
2,766,425	+	icd	SO2629	0.85	-0.6
2,766,445	+	icd	SO2629	0.86	+0.5
2,766,873	-				+0.4
2,767,076	+				+1.7
2,767,127	-				-2.6
2,767,140	+				-1.5
2,767,165	+				+1.8
2,767,179	+		SO_2630	0.11	+1.4
2,767,364	+		SO_2630	0.34	-0.5
2,767,741	+		SO_2630	0.82	-2.1
2,767,749	-		SO_2630	0.83	-0.0
2,767,798	-		SO_2630	0.89	-2.1
2,767,798	-		SO_2630	0.89	-1.2
2,767,854	-				-1.2
2,767,890	-				+1.1
2,767,921	-				-3.0
2,767,987	+				-0.5
2,767,987	+				-0.0
2,768,105	-		SO2631	0.34	-0.6
2,768,237	+		SO2631	0.61	-0.6
2,768,237	+		SO2631	0.61	+1.1
2,768,245	-		SO2631	0.63	-0.2
2,768,245	-		SO2631	0.63	+2.2
2,768,250	-		SO2631	0.64	-0.5
2,768,287	+		SO2631	0.72	+0.4
2,768,295	-		SO2631	0.74	-1.8
2,768,295	-		SO2631	0.74	-0.3
2,768,319	-		SO2631	0.79	+0.8
2,768,326	+		SO2631	0.80	-1.2