Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_708 and HP15_709 overlap by 4 nucleotides HP15_709 and HP15_710 overlap by 4 nucleotides HP15_710 and HP15_711 are separated by 202 nucleotides
HP15_708: HP15_708 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, at 716,306 to 717,169
_708
HP15_709: HP15_709 - outer-membrane lipoprotein lolB precursor, at 717,166 to 717,798
_709
HP15_710: HP15_710 - tetratricopeptide TPR_2 repeat protein, at 717,795 to 719,573
_710
HP15_711: HP15_711 - glutamyl-tRNA reductase, at 719,776 to 721,080
_711
Position (kb) 717
718
719
720 Strain fitness (log2 ratio) -1
0
1 at 717.871 kb on - strand at 717.987 kb on - strand, within HP15_710 at 718.087 kb on - strand, within HP15_710 at 718.127 kb on - strand, within HP15_710 at 718.200 kb on - strand, within HP15_710 at 718.301 kb on - strand, within HP15_710 at 718.301 kb on - strand, within HP15_710 at 718.416 kb on - strand, within HP15_710 at 718.457 kb on - strand, within HP15_710 at 718.457 kb on - strand, within HP15_710 at 718.476 kb on - strand, within HP15_710 at 718.486 kb on - strand, within HP15_710 at 718.516 kb on - strand, within HP15_710 at 718.563 kb on + strand, within HP15_710 at 718.721 kb on - strand, within HP15_710 at 718.903 kb on - strand, within HP15_710 at 718.913 kb on - strand, within HP15_710 at 718.964 kb on - strand, within HP15_710 at 719.681 kb on + strand at 719.704 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 717,871 - -0.9 717,987 - HP15_710 0.11 +0.8 718,087 - HP15_710 0.16 -0.3 718,127 - HP15_710 0.19 +0.5 718,200 - HP15_710 0.23 -0.0 718,301 - HP15_710 0.28 +0.3 718,301 - HP15_710 0.28 +0.1 718,416 - HP15_710 0.35 +0.2 718,457 - HP15_710 0.37 +0.3 718,457 - HP15_710 0.37 +0.2 718,476 - HP15_710 0.38 +0.3 718,486 - HP15_710 0.39 +0.2 718,516 - HP15_710 0.41 -0.7 718,563 + HP15_710 0.43 -0.0 718,721 - HP15_710 0.52 +0.4 718,903 - HP15_710 0.62 +0.5 718,913 - HP15_710 0.63 +0.4 718,964 - HP15_710 0.66 +0.2 719,681 + -0.0 719,704 - +0.4
Or see this region's nucleotide sequence