Experiment: Glucose defined 30C timecourse1 timepoint 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1895 and Psest_1896 are separated by 158 nucleotides Psest_1896 and Psest_1897 are separated by 109 nucleotides
Psest_1895: Psest_1895 - Signal transduction histidine kinase, at 2,004,323 to 2,005,774
_1895
Psest_1896: Psest_1896 - ABC-type sugar transport system, periplasmic component, at 2,005,933 to 2,007,180
_1896
Psest_1897: Psest_1897 - ABC-type sugar transport systems, permease components, at 2,007,290 to 2,008,207
_1897
Position (kb)
2005
2006
2007
2008 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 2004.999 kb on + strand, within Psest_1895 at 2005.477 kb on + strand, within Psest_1895 at 2005.517 kb on + strand, within Psest_1895 at 2005.517 kb on + strand, within Psest_1895 at 2005.795 kb on + strand at 2005.807 kb on - strand at 2005.807 kb on - strand at 2005.873 kb on - strand at 2005.873 kb on - strand at 2006.317 kb on + strand, within Psest_1896 at 2006.317 kb on + strand, within Psest_1896 at 2006.317 kb on + strand, within Psest_1896 at 2006.318 kb on - strand, within Psest_1896 at 2006.318 kb on - strand, within Psest_1896 at 2006.517 kb on - strand, within Psest_1896 at 2006.633 kb on - strand, within Psest_1896 at 2006.633 kb on - strand, within Psest_1896 at 2006.633 kb on - strand, within Psest_1896 at 2006.771 kb on - strand, within Psest_1896 at 2007.066 kb on + strand at 2007.066 kb on + strand at 2007.066 kb on + strand at 2007.066 kb on + strand at 2007.067 kb on - strand at 2007.067 kb on - strand at 2007.067 kb on - strand at 2007.071 kb on - strand at 2007.071 kb on - strand at 2007.071 kb on - strand at 2007.071 kb on - strand at 2007.071 kb on - strand at 2007.407 kb on + strand, within Psest_1897 at 2007.407 kb on + strand, within Psest_1897 at 2007.408 kb on - strand, within Psest_1897 at 2007.408 kb on - strand, within Psest_1897 at 2007.413 kb on + strand, within Psest_1897 at 2007.414 kb on - strand, within Psest_1897 at 2007.414 kb on - strand, within Psest_1897 at 2007.414 kb on - strand, within Psest_1897 at 2007.414 kb on - strand, within Psest_1897 at 2007.414 kb on - strand, within Psest_1897 at 2007.467 kb on + strand, within Psest_1897 at 2007.468 kb on - strand, within Psest_1897 at 2007.468 kb on - strand, within Psest_1897 at 2007.468 kb on - strand, within Psest_1897 at 2007.468 kb on - strand, within Psest_1897 at 2007.468 kb on - strand, within Psest_1897 at 2007.647 kb on + strand, within Psest_1897 at 2007.647 kb on + strand, within Psest_1897 at 2007.647 kb on + strand, within Psest_1897 at 2007.647 kb on + strand, within Psest_1897 at 2007.647 kb on + strand, within Psest_1897 at 2007.647 kb on + strand, within Psest_1897 at 2007.647 kb on + strand, within Psest_1897 at 2007.648 kb on - strand, within Psest_1897 at 2007.648 kb on - strand, within Psest_1897 at 2007.648 kb on - strand, within Psest_1897 at 2007.648 kb on - strand, within Psest_1897 at 2007.648 kb on - strand, within Psest_1897 at 2007.648 kb on - strand, within Psest_1897 at 2007.653 kb on + strand, within Psest_1897 at 2007.654 kb on - strand, within Psest_1897 at 2007.797 kb on + strand, within Psest_1897 at 2007.797 kb on + strand, within Psest_1897 at 2007.797 kb on + strand, within Psest_1897 at 2007.797 kb on + strand, within Psest_1897 at 2007.797 kb on + strand, within Psest_1897 at 2007.797 kb on + strand, within Psest_1897 at 2007.798 kb on - strand, within Psest_1897 at 2007.798 kb on - strand, within Psest_1897 at 2007.798 kb on - strand, within Psest_1897 at 2007.798 kb on - strand, within Psest_1897 at 2007.798 kb on - strand, within Psest_1897 at 2007.798 kb on - strand, within Psest_1897 at 2007.798 kb on - strand, within Psest_1897 at 2007.798 kb on - strand, within Psest_1897 at 2007.798 kb on - strand, within Psest_1897 at 2007.929 kb on + strand, within Psest_1897 at 2007.930 kb on - strand, within Psest_1897 at 2007.930 kb on - strand, within Psest_1897 at 2007.995 kb on - strand, within Psest_1897 at 2008.079 kb on + strand, within Psest_1897 at 2008.079 kb on + strand, within Psest_1897 at 2008.080 kb on - strand, within Psest_1897 at 2008.080 kb on - strand, within Psest_1897 at 2008.080 kb on - strand, within Psest_1897 at 2008.087 kb on + strand, within Psest_1897 at 2008.169 kb on + strand at 2008.176 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glucose defined 30C timecourse1 timepoint 1 remove 2,004,999 + Psest_1895 0.47 -2.0 2,005,477 + Psest_1895 0.79 -2.2 2,005,517 + Psest_1895 0.82 -2.7 2,005,517 + Psest_1895 0.82 -3.7 2,005,795 + +1.0 2,005,807 - +0.1 2,005,807 - +0.1 2,005,873 - -1.0 2,005,873 - -1.3 2,006,317 + Psest_1896 0.31 -2.9 2,006,317 + Psest_1896 0.31 -2.3 2,006,317 + Psest_1896 0.31 -0.1 2,006,318 - Psest_1896 0.31 -4.0 2,006,318 - Psest_1896 0.31 -4.4 2,006,517 - Psest_1896 0.47 -2.6 2,006,633 - Psest_1896 0.56 -4.2 2,006,633 - Psest_1896 0.56 -3.8 2,006,633 - Psest_1896 0.56 -2.5 2,006,771 - Psest_1896 0.67 -2.2 2,007,066 + -3.6 2,007,066 + -1.6 2,007,066 + -1.6 2,007,066 + -1.6 2,007,067 - -1.3 2,007,067 - -1.8 2,007,067 - -3.1 2,007,071 - -2.0 2,007,071 - -4.5 2,007,071 - -1.5 2,007,071 - -2.8 2,007,071 - -2.7 2,007,407 + Psest_1897 0.13 -3.6 2,007,407 + Psest_1897 0.13 -3.0 2,007,408 - Psest_1897 0.13 -2.8 2,007,408 - Psest_1897 0.13 -0.6 2,007,413 + Psest_1897 0.13 -2.7 2,007,414 - Psest_1897 0.14 -4.1 2,007,414 - Psest_1897 0.14 -3.5 2,007,414 - Psest_1897 0.14 -4.2 2,007,414 - Psest_1897 0.14 -2.6 2,007,414 - Psest_1897 0.14 -3.8 2,007,467 + Psest_1897 0.19 -3.1 2,007,468 - Psest_1897 0.19 -2.3 2,007,468 - Psest_1897 0.19 -4.2 2,007,468 - Psest_1897 0.19 -2.7 2,007,468 - Psest_1897 0.19 -1.9 2,007,468 - Psest_1897 0.19 -3.4 2,007,647 + Psest_1897 0.39 -3.1 2,007,647 + Psest_1897 0.39 -1.6 2,007,647 + Psest_1897 0.39 -3.0 2,007,647 + Psest_1897 0.39 -2.3 2,007,647 + Psest_1897 0.39 -1.6 2,007,647 + Psest_1897 0.39 -1.8 2,007,647 + Psest_1897 0.39 -2.9 2,007,648 - Psest_1897 0.39 -2.5 2,007,648 - Psest_1897 0.39 -1.6 2,007,648 - Psest_1897 0.39 -3.6 2,007,648 - Psest_1897 0.39 -2.3 2,007,648 - Psest_1897 0.39 -5.7 2,007,648 - Psest_1897 0.39 -0.6 2,007,653 + Psest_1897 0.40 -0.6 2,007,654 - Psest_1897 0.40 -2.0 2,007,797 + Psest_1897 0.55 -1.3 2,007,797 + Psest_1897 0.55 -2.0 2,007,797 + Psest_1897 0.55 -6.1 2,007,797 + Psest_1897 0.55 -2.6 2,007,797 + Psest_1897 0.55 -4.7 2,007,797 + Psest_1897 0.55 -1.8 2,007,798 - Psest_1897 0.55 -4.1 2,007,798 - Psest_1897 0.55 -2.2 2,007,798 - Psest_1897 0.55 -2.9 2,007,798 - Psest_1897 0.55 -1.8 2,007,798 - Psest_1897 0.55 -0.6 2,007,798 - Psest_1897 0.55 -4.4 2,007,798 - Psest_1897 0.55 -3.4 2,007,798 - Psest_1897 0.55 -5.0 2,007,798 - Psest_1897 0.55 -1.5 2,007,929 + Psest_1897 0.70 -3.1 2,007,930 - Psest_1897 0.70 -4.5 2,007,930 - Psest_1897 0.70 -2.5 2,007,995 - Psest_1897 0.77 -3.3 2,008,079 + Psest_1897 0.86 -2.0 2,008,079 + Psest_1897 0.86 -2.2 2,008,080 - Psest_1897 0.86 -2.5 2,008,080 - Psest_1897 0.86 -5.1 2,008,080 - Psest_1897 0.86 -1.6 2,008,087 + Psest_1897 0.87 -1.0 2,008,169 + -2.9 2,008,176 - -2.2
Or see this region's nucleotide sequence