Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1453 and HP15_1454 are separated by 132 nucleotides HP15_1454 and HP15_1455 are separated by 5 nucleotides HP15_1455 and HP15_1456 are separated by 230 nucleotides
HP15_1453: HP15_1453 - long-chain acyl-CoA synthetase, at 1,528,203 to 1,529,840
_1453
HP15_1454: HP15_1454 - thioesterase domain protein, at 1,529,973 to 1,530,458
_1454
HP15_1455: HP15_1455 - iron(III) ABC transporter, permease protein, at 1,530,464 to 1,532,077
_1455
HP15_1456: HP15_1456 - extracellular solute-binding protein, family 1, at 1,532,308 to 1,533,318
_1456
Position (kb)
1530
1531
1532
1533 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1529.561 kb on + strand, within HP15_1453 at 1529.668 kb on - strand, within HP15_1453 at 1529.685 kb on + strand at 1529.941 kb on + strand at 1529.949 kb on - strand at 1530.110 kb on + strand, within HP15_1454 at 1530.208 kb on - strand, within HP15_1454 at 1530.236 kb on + strand, within HP15_1454 at 1530.460 kb on - strand at 1530.482 kb on + strand at 1530.579 kb on - strand at 1530.739 kb on + strand, within HP15_1455 at 1530.837 kb on + strand, within HP15_1455 at 1530.870 kb on + strand, within HP15_1455 at 1530.936 kb on - strand at 1530.984 kb on + strand, within HP15_1455 at 1531.287 kb on - strand, within HP15_1455 at 1531.727 kb on - strand, within HP15_1455 at 1531.766 kb on + strand, within HP15_1455 at 1531.767 kb on + strand, within HP15_1455 at 1531.947 kb on + strand at 1532.057 kb on + strand at 1532.057 kb on + strand at 1532.065 kb on - strand at 1532.065 kb on - strand at 1532.262 kb on + strand at 1532.371 kb on + strand at 1532.581 kb on + strand, within HP15_1456 at 1532.711 kb on + strand, within HP15_1456 at 1532.895 kb on + strand, within HP15_1456 at 1532.988 kb on - strand, within HP15_1456
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 1,529,561 + HP15_1453 0.83 +0.2 1,529,668 - HP15_1453 0.89 +0.1 1,529,685 + -0.4 1,529,941 + -0.5 1,529,949 - -0.4 1,530,110 + HP15_1454 0.28 -0.0 1,530,208 - HP15_1454 0.48 -0.1 1,530,236 + HP15_1454 0.54 +0.7 1,530,460 - +1.1 1,530,482 + -2.7 1,530,579 - -2.5 1,530,739 + HP15_1455 0.17 -3.2 1,530,837 + HP15_1455 0.23 -2.7 1,530,870 + HP15_1455 0.25 -3.0 1,530,936 - +0.5 1,530,984 + HP15_1455 0.32 -2.3 1,531,287 - HP15_1455 0.51 -2.1 1,531,727 - HP15_1455 0.78 -1.1 1,531,766 + HP15_1455 0.81 -3.6 1,531,767 + HP15_1455 0.81 -0.6 1,531,947 + -0.3 1,532,057 + -2.7 1,532,057 + -2.4 1,532,065 - -2.1 1,532,065 - -3.7 1,532,262 + +0.0 1,532,371 + -1.4 1,532,581 + HP15_1456 0.27 -2.5 1,532,711 + HP15_1456 0.40 -2.4 1,532,895 + HP15_1456 0.58 -1.8 1,532,988 - HP15_1456 0.67 -2.3
Or see this region's nucleotide sequence