Strain Fitness in Shewanella amazonensis SB2B around Sama_3542

Experiment: Motility assay, center cut sample 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 2
4,173,209	+				-0.6
4,173,209	+				-0.4
4,173,231	+				-0.0
4,173,303	+				+0.5
4,173,303	+				+0.7
4,173,303	+				+0.1
4,173,303	+				-0.2
4,173,303	+				-1.5
4,173,303	+				-0.4
4,173,303	+				-0.8
4,173,303	+				-1.8
4,173,304	-				-2.0
4,173,304	-				+0.6
4,173,304	-				-1.9
4,173,304	-				-0.5
4,173,462	+		Sama_3541	0.25	+0.4
4,173,462	+		Sama_3541	0.25	-2.6
4,173,463	-		Sama_3541	0.25	+0.0
4,173,463	-		Sama_3541	0.25	+0.7
4,173,463	-		Sama_3541	0.25	-1.0
4,173,463	-		Sama_3541	0.25	+1.1
4,173,463	-		Sama_3541	0.25	-0.4
4,173,463	-		Sama_3541	0.25	-1.9
4,173,463	-		Sama_3541	0.25	-2.6
4,173,498	+		Sama_3541	0.29	+0.5
4,173,499	-		Sama_3541	0.29	+0.3
4,173,648	-		Sama_3541	0.46	-0.1
4,173,648	-		Sama_3541	0.46	+0.8
4,173,699	+		Sama_3541	0.52	-0.1
4,173,700	-		Sama_3541	0.52	-1.8
4,173,700	-		Sama_3541	0.52	+1.5
4,173,747	+		Sama_3541	0.57	-0.9
4,173,747	+		Sama_3541	0.57	-2.2
4,173,748	-		Sama_3541	0.57	+0.5
4,173,991	+		Sama_3541	0.84	+0.1
4,173,991	+		Sama_3541	0.84	-0.4
4,173,991	+		Sama_3541	0.84	-1.2
4,173,992	-		Sama_3541	0.85	+2.4
4,173,992	-		Sama_3541	0.85	-0.0
4,173,992	-		Sama_3541	0.85	-0.7
4,173,992	-		Sama_3541	0.85	-1.5
4,174,152	+				+1.5
4,174,152	+				+0.8
4,174,152	+				-0.3
4,174,152	+				+0.5
4,174,153	-				-1.9
4,174,153	-				-0.8
4,174,153	-				-2.3
4,174,153	-				-0.8
4,174,153	-				-1.5
4,174,180	+				+0.7
4,174,180	+				-1.8
4,174,181	-				-0.5
4,174,181	-				-0.4
4,174,181	-				-1.1
4,174,197	+				+1.8
4,174,197	+				+0.5
4,174,198	-				+2.3
4,174,198	-				+2.2
4,174,198	-				-0.2
4,174,263	+		Sama_3542	0.17	+0.4
4,174,263	+		Sama_3542	0.17	+1.5
4,174,263	+		Sama_3542	0.17	+0.7
4,174,264	-		Sama_3542	0.17	-0.4
4,174,264	-		Sama_3542	0.17	+1.7
4,174,264	-		Sama_3542	0.17	-2.2
4,174,275	+		Sama_3542	0.20	-2.3
4,174,275	+		Sama_3542	0.20	+0.6
4,174,275	+		Sama_3542	0.20	-0.1
4,174,275	+		Sama_3542	0.20	+2.0
4,174,275	+		Sama_3542	0.20	-0.8
4,174,275	+		Sama_3542	0.20	+1.0
4,174,275	+		Sama_3542	0.20	+0.9
4,174,276	-		Sama_3542	0.20	+1.7
4,174,276	-		Sama_3542	0.20	+1.8
4,174,286	+		Sama_3542	0.23	-0.2
4,174,286	+		Sama_3542	0.23	+1.4
4,174,287	-		Sama_3542	0.23	+0.4
4,174,309	+		Sama_3542	0.29	+0.8
4,174,309	+		Sama_3542	0.29	+0.9
4,174,310	-		Sama_3542	0.29	+2.5
4,174,335	+		Sama_3542	0.35	+0.4
4,174,335	+		Sama_3542	0.35	+0.7
4,174,336	-		Sama_3542	0.35	+1.3
4,174,536	+		Sama_3542	0.86	-1.3
4,174,537	-		Sama_3542	0.86	+0.6
4,174,537	-		Sama_3542	0.86	+2.0
4,174,537	-		Sama_3542	0.86	-0.4
4,174,557	+				+0.6
4,174,557	+				-1.7
4,174,557	+				+3.3
4,174,557	+				+0.3
4,174,557	+				-2.0
4,174,557	+				-2.6
4,174,558	-				-0.0
4,174,558	-				-0.4
4,174,558	-				-1.7
4,174,569	+				-1.3
4,174,569	+				+1.4
4,174,569	+				-1.6
4,174,569	+				+0.2
4,174,569	+				+0.2
4,174,569	+				-0.5
4,174,570	-				-0.2
4,174,570	-				+0.4
4,174,570	-				-0.0
4,174,570	-				-0.5
4,174,570	-				-0.6
4,174,570	-				+0.0
4,174,573	+				+0.2
4,174,573	+				-1.1
4,174,574	-				-1.0
4,174,574	-				+1.4
4,174,617	+				-0.6
4,174,617	+				+0.0
4,174,617	+				-0.5
4,174,618	-				-1.2
4,174,618	-				-1.6
4,174,618	-				-0.6
4,174,618	-				+0.9
4,174,644	+				-0.3
4,174,645	-				+0.7
4,174,650	+				-0.6
4,174,650	+				-0.8
4,174,650	+				+0.4
4,174,650	+				-1.5
4,174,650	+				-0.3
4,174,651	-				-3.2
4,174,651	-				+2.2
4,174,651	-				+0.3
4,174,651	-				-0.1
4,174,685	+				+1.2
4,174,686	-				+3.2
4,174,698	+				+0.7
4,174,698	+				+2.7
4,174,698	+				+0.6
4,174,699	-				-1.0
4,174,699	-				-0.2
4,174,701	+				-0.6
4,174,701	+				-1.4
4,174,701	+				+1.5
4,174,701	+				+1.2
4,174,701	+				+0.1
4,174,701	+				+1.5
4,174,701	+				-2.0
4,174,702	-				-0.6
4,174,702	-				-1.7
4,174,702	-				-0.1
4,174,702	-				-2.4
4,174,702	-				+1.7
4,174,702	-				-0.6
4,174,732	-				-0.7
4,174,735	+				+0.4
4,174,735	+				-0.6
4,174,735	+				-2.6
4,174,735	+				+0.9
4,174,735	+				+2.6
4,174,735	+				-0.9
4,174,735	+				-2.4
4,174,735	+				+1.1
4,174,735	+				-2.3
4,174,735	+				+0.9
4,174,735	+				+0.7
4,174,736	-				-1.0
4,174,736	-				+0.3
4,174,736	-				-1.5
4,174,736	-				+0.8
4,174,736	-				+1.7
4,174,736	-				-0.4
4,174,736	-				+2.0
4,174,907	+		Sama_3543	0.16	+0.2
4,174,907	+		Sama_3543	0.16	+1.8
4,174,907	+		Sama_3543	0.16	+1.2
4,174,907	+		Sama_3543	0.16	-0.8
4,174,907	+		Sama_3543	0.16	-0.4
4,174,907	+		Sama_3543	0.16	-1.3
4,174,907	+		Sama_3543	0.16	+0.1
4,174,907	+		Sama_3543	0.16	+0.4
4,174,907	+		Sama_3543	0.16	+0.2
4,174,908	-		Sama_3543	0.16	+0.8
4,174,908	-		Sama_3543	0.16	-0.2
4,174,908	-		Sama_3543	0.16	+0.2
4,174,908	-		Sama_3543	0.16	-0.2
4,174,908	-		Sama_3543	0.16	-0.6
4,174,908	-		Sama_3543	0.16	-0.2
4,174,908	-		Sama_3543	0.16	+0.1
4,174,931	+		Sama_3543	0.18	-0.2
4,174,931	+		Sama_3543	0.18	+2.3
4,174,931	+		Sama_3543	0.18	+0.9
4,174,931	+		Sama_3543	0.18	+0.6
4,174,931	+		Sama_3543	0.18	-0.3
4,174,932	-		Sama_3543	0.18	+0.6
4,174,932	-		Sama_3543	0.18	+1.0
4,174,932	-		Sama_3543	0.18	+1.6
4,174,932	-		Sama_3543	0.18	+1.5
4,174,932	-		Sama_3543	0.18	+1.5
4,174,932	-		Sama_3543	0.18	-1.6
4,174,932	-		Sama_3543	0.18	+2.5
4,174,955	+		Sama_3543	0.20	-0.2
4,174,955	+		Sama_3543	0.20	-0.9
4,174,997	-		Sama_3543	0.23	-0.4
4,175,014	+		Sama_3543	0.24	+0.7
4,175,014	+		Sama_3543	0.24	+2.2
4,175,015	-		Sama_3543	0.24	-1.9
4,175,015	-		Sama_3543	0.24	-0.7
4,175,036	+		Sama_3543	0.26	+0.6
4,175,037	-		Sama_3543	0.26	-1.2
4,175,037	-		Sama_3543	0.26	-0.4
4,175,037	-		Sama_3543	0.26	-0.7
4,175,112	+		Sama_3543	0.31	-0.7
4,175,112	+		Sama_3543	0.31	-0.2
4,175,121	+		Sama_3543	0.32	-0.3
4,175,136	+		Sama_3543	0.33	+2.3
4,175,137	-		Sama_3543	0.33	+0.2
4,175,150	+		Sama_3543	0.34	-0.5
4,175,150	+		Sama_3543	0.34	+2.4
4,175,150	+		Sama_3543	0.34	+1.9
4,175,150	+		Sama_3543	0.34	-1.0
4,175,150	+		Sama_3543	0.34	-2.5
4,175,150	+		Sama_3543	0.34	-1.0
4,175,150	+		Sama_3543	0.34	-0.1
4,175,150	+		Sama_3543	0.34	+1.2
4,175,151	-		Sama_3543	0.34	-2.1
4,175,151	-		Sama_3543	0.34	+0.1
4,175,151	-		Sama_3543	0.34	+1.6
4,175,151	-		Sama_3543	0.34	-0.4
4,175,151	-		Sama_3543	0.34	+1.5
4,175,151	-		Sama_3543	0.34	+0.1
4,175,151	-		Sama_3543	0.34	+1.5
4,175,154	+		Sama_3543	0.34	+0.1
4,175,154	+		Sama_3543	0.34	-1.0
4,175,154	+		Sama_3543	0.34	+1.5
4,175,154	+		Sama_3543	0.34	+2.5
4,175,155	-		Sama_3543	0.34	-0.2
4,175,155	-		Sama_3543	0.34	+1.0
4,175,155	-		Sama_3543	0.34	+1.7
4,175,155	-		Sama_3543	0.34	+1.1
4,175,155	-		Sama_3543	0.34	-1.2
4,175,155	-		Sama_3543	0.34	+1.4
4,175,155	-		Sama_3543	0.34	+0.2
4,175,155	-		Sama_3543	0.34	+0.1
4,175,155	-		Sama_3543	0.34	+1.1
4,175,188	+		Sama_3543	0.37	-0.6
4,175,188	+		Sama_3543	0.37	-0.0
4,175,188	+		Sama_3543	0.37	-2.0
4,175,195	+		Sama_3543	0.37	-0.9
4,175,195	+		Sama_3543	0.37	+1.0
4,175,195	+		Sama_3543	0.37	+2.0
4,175,195	+		Sama_3543	0.37	-1.7
4,175,195	+		Sama_3543	0.37	-2.5
4,175,195	+		Sama_3543	0.37	-0.4
4,175,195	+		Sama_3543	0.37	-0.2
4,175,196	-		Sama_3543	0.37	-0.4
4,175,196	-		Sama_3543	0.37	+1.3
4,175,196	-		Sama_3543	0.37	-0.1
4,175,196	-		Sama_3543	0.37	-1.6
4,175,196	-		Sama_3543	0.37	-0.5
4,175,215	+		Sama_3543	0.39	+0.2
4,175,215	+		Sama_3543	0.39	+0.9
4,175,215	+		Sama_3543	0.39	+1.1
4,175,215	+		Sama_3543	0.39	-1.2
4,175,215	+		Sama_3543	0.39	+0.8
4,175,215	+		Sama_3543	0.39	+0.8
4,175,215	+		Sama_3543	0.39	+0.8
4,175,215	+		Sama_3543	0.39	-0.4
4,175,215	+		Sama_3543	0.39	-0.8
4,175,215	+		Sama_3543	0.39	+0.8
4,175,215	+		Sama_3543	0.39	-1.6
4,175,215	+		Sama_3543	0.39	+1.9
4,175,216	-		Sama_3543	0.39	+1.4
4,175,216	-		Sama_3543	0.39	+1.1
4,175,216	-		Sama_3543	0.39	+0.7
4,175,216	-		Sama_3543	0.39	+0.8
4,175,216	-		Sama_3543	0.39	+0.6
4,175,216	-		Sama_3543	0.39	-1.6
4,175,223	+		Sama_3543	0.39	-0.0
4,175,224	-		Sama_3543	0.39	-1.4
4,175,224	-		Sama_3543	0.39	+0.8
4,175,367	+		Sama_3543	0.50	+0.7
4,175,368	-		Sama_3543	0.50	-0.2
4,175,368	-		Sama_3543	0.50	-0.5
4,175,433	+		Sama_3543	0.55	-0.3
4,175,451	+		Sama_3543	0.56	-0.4
4,175,451	+		Sama_3543	0.56	-3.6
4,175,514	+		Sama_3543	0.61	+2.0
4,175,514	+		Sama_3543	0.61	-1.4
4,175,514	+		Sama_3543	0.61	-0.4
4,175,514	+		Sama_3543	0.61	-1.1
4,175,514	+		Sama_3543	0.61	+0.7
4,175,514	+		Sama_3543	0.61	-0.6
4,175,514	+		Sama_3543	0.61	+1.7
4,175,514	+		Sama_3543	0.61	-0.2
4,175,514	+		Sama_3543	0.61	+2.8
4,175,515	-		Sama_3543	0.61	-0.5
4,175,515	-		Sama_3543	0.61	+0.7
4,175,515	-		Sama_3543	0.61	+2.2
4,175,515	-		Sama_3543	0.61	+0.9
4,175,515	-		Sama_3543	0.61	-1.7
4,175,515	-		Sama_3543	0.61	+2.3
4,175,515	-		Sama_3543	0.61	+1.4
4,175,515	-		Sama_3543	0.61	+1.9
4,175,515	-		Sama_3543	0.61	+1.1
4,175,583	+		Sama_3543	0.66	-1.0