Strain Fitness in Shewanella amazonensis SB2B around Sama_3206

Experiment: Motility assay, center cut sample 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 2
3,796,219	+				-0.7
3,796,223	+				-1.5
3,796,224	-				-0.5
3,796,237	+				+0.6
3,796,240	+				-0.0
3,796,240	+				+2.6
3,796,240	+				+0.8
3,796,241	-				+2.0
3,796,282	+				+2.7
3,796,283	-				+1.7
3,796,288	+				+1.5
3,796,289	-				+0.1
3,796,289	-				+0.8
3,796,289	-				+2.0
3,796,505	+				+0.4
3,796,513	+				-1.0
3,796,513	+				+2.4
3,796,514	-				+1.8
3,796,534	+				-1.1
3,796,535	-				+1.8
3,796,535	-				+0.2
3,796,560	+		Sama_3206	0.12	+1.4
3,796,560	+		Sama_3206	0.12	+2.0
3,796,591	-		Sama_3206	0.20	+3.2
3,796,802	+		Sama_3206	0.76	+1.2
3,796,802	+		Sama_3206	0.76	+2.6
3,796,876	+				-1.0
3,796,889	+				+3.3
3,796,889	+				+2.2
3,796,889	+				-1.5
3,796,889	+				-0.2
3,796,947	+				+2.0
3,796,948	-				+1.2
3,796,960	+				+2.1
3,796,960	+				+0.6
3,796,980	+		Sama_3207	0.11	+1.4
3,796,981	-		Sama_3207	0.11	+1.6
3,796,984	+		Sama_3207	0.12	+1.1
3,796,984	+		Sama_3207	0.12	+4.8
3,796,984	+		Sama_3207	0.12	+0.2
3,796,984	+		Sama_3207	0.12	+0.6
3,796,985	-		Sama_3207	0.12	-0.5
3,797,011	+		Sama_3207	0.15	+0.1
3,797,011	+		Sama_3207	0.15	-0.8
3,797,012	-		Sama_3207	0.16	+1.2
3,797,016	-		Sama_3207	0.16	+4.0
3,797,023	+		Sama_3207	0.17	+1.0
3,797,023	+		Sama_3207	0.17	+3.2
3,797,023	+		Sama_3207	0.17	+0.8
3,797,023	+		Sama_3207	0.17	+2.8
3,797,023	+		Sama_3207	0.17	+1.4
3,797,023	+		Sama_3207	0.17	+2.7
3,797,024	-		Sama_3207	0.17	+0.8
3,797,148	-		Sama_3207	0.34	+1.0
3,797,156	+		Sama_3207	0.35	+4.3
3,797,189	+		Sama_3207	0.39	+5.5
3,797,238	+		Sama_3207	0.46	-1.2
3,797,247	-		Sama_3207	0.47	-0.2
3,797,247	-		Sama_3207	0.47	+2.2
3,797,247	-		Sama_3207	0.47	+0.2
3,797,247	-		Sama_3207	0.47	+1.1
3,797,352	-		Sama_3207	0.61	+2.5
3,797,362	+		Sama_3207	0.62	+2.3
3,797,418	+		Sama_3207	0.69	-1.8
3,797,418	+		Sama_3207	0.69	+2.6
3,797,418	+		Sama_3207	0.69	-0.8
3,797,474	+		Sama_3207	0.77	-0.5
3,797,474	+		Sama_3207	0.77	+4.4
3,797,475	-		Sama_3207	0.77	+2.3
3,797,475	-		Sama_3207	0.77	-1.0
3,797,494	+		Sama_3207	0.80	+2.8
3,797,494	+		Sama_3207	0.80	+3.7
3,797,494	+		Sama_3207	0.80	+2.2
3,797,498	-		Sama_3207	0.80	-1.5
3,797,602	+				-0.6
3,797,602	+				-2.2
3,797,711	+				-1.3
3,797,711	+				-1.6
3,797,722	+				-0.5
3,797,722	+				+0.9
3,797,728	+				-1.6
3,797,728	+				+0.6
3,797,728	+				+4.8
3,797,728	+				+1.6
3,797,728	+				+0.0
3,797,728	+				-0.5
3,797,729	-				-0.9
3,797,729	-				+2.4
3,797,729	-				+4.9
3,797,729	-				+2.7
3,797,741	+				+1.2
3,797,741	+				-1.5
3,797,741	+				+2.9
3,797,741	+				+1.9
3,797,741	+				+0.5
3,797,742	-				+4.1
3,797,742	-				+4.4
3,797,742	-				+0.6
3,797,742	-				+2.8
3,797,752	+				+3.3
3,797,753	-				+2.5
3,797,753	-				+4.5
3,797,758	+				+2.5
3,797,758	+				+0.5
3,797,759	-				+2.3
3,797,852	+		Sama_3208	0.20	+0.9
3,797,852	+		Sama_3208	0.20	+0.8
3,797,852	+		Sama_3208	0.20	+2.9
3,797,852	+		Sama_3208	0.20	+1.6
3,797,852	+		Sama_3208	0.20	+1.3
3,797,853	-		Sama_3208	0.21	+2.1
3,797,853	-		Sama_3208	0.21	+3.1
3,797,853	-		Sama_3208	0.21	+2.6
3,797,853	-		Sama_3208	0.21	+4.0
3,797,853	-		Sama_3208	0.21	+1.4
3,797,853	-		Sama_3208	0.21	+2.6