Strain Fitness in Shewanella amazonensis SB2B around Sama_2732

Experiment: Motility assay, center cut sample 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 2
3,265,005	+				+1.3
3,265,005	+				-1.0
3,265,005	+				+0.3
3,265,005	+				-2.9
3,265,005	+				+1.0
3,265,005	+				+0.9
3,265,005	+				-1.4
3,265,006	-				-1.9
3,265,006	-				-0.3
3,265,006	+				-0.7
3,265,006	-				-0.9
3,265,006	-				-1.3
3,265,010	+				-1.3
3,265,010	+				+0.1
3,265,010	+				-2.2
3,265,010	+				+0.9
3,265,026	-				-0.7
3,265,046	+				+0.5
3,265,046	+				-1.1
3,265,046	+				-1.8
3,265,046	+				-0.2
3,265,046	+				-0.1
3,265,047	-				+0.7
3,265,047	-				+0.7
3,265,253	+		Sama_2731	0.26	-0.3
3,265,253	+		Sama_2731	0.26	-1.7
3,265,256	+		Sama_2731	0.26	-1.3
3,265,256	+		Sama_2731	0.26	+1.4
3,265,256	+		Sama_2731	0.26	-2.1
3,265,257	-		Sama_2731	0.26	+0.2
3,265,257	-		Sama_2731	0.26	+0.2
3,265,257	-		Sama_2731	0.26	-1.1
3,265,323	+		Sama_2731	0.35	-2.9
3,265,342	+		Sama_2731	0.37	-1.8
3,265,352	+		Sama_2731	0.38	-0.6
3,265,352	+		Sama_2731	0.38	+1.0
3,265,352	+		Sama_2731	0.38	+1.5
3,265,353	-		Sama_2731	0.39	-1.5
3,265,383	+		Sama_2731	0.42	+1.1
3,265,383	+		Sama_2731	0.42	-1.9
3,265,383	+		Sama_2731	0.42	+2.0
3,265,384	-		Sama_2731	0.43	+0.1
3,265,384	-		Sama_2731	0.43	-0.2
3,265,384	-		Sama_2731	0.43	+1.3
3,265,384	-		Sama_2731	0.43	-2.4
3,265,400	+		Sama_2731	0.45	+1.1
3,265,400	+		Sama_2731	0.45	-1.3
3,265,401	-		Sama_2731	0.45	-0.4
3,265,490	+		Sama_2731	0.56	-2.7
3,265,490	+		Sama_2731	0.56	+1.9
3,265,516	+		Sama_2731	0.59	+0.2
3,265,517	-		Sama_2731	0.60	-1.0
3,265,526	+		Sama_2731	0.61	-0.2
3,265,526	+		Sama_2731	0.61	-1.8
3,265,526	+		Sama_2731	0.61	-2.0
3,265,527	-		Sama_2731	0.61	-0.9
3,265,527	-		Sama_2731	0.61	-1.3
3,265,527	-		Sama_2731	0.61	+2.4
3,265,527	-		Sama_2731	0.61	-0.5
3,265,527	-		Sama_2731	0.61	-0.1
3,265,538	+		Sama_2731	0.62	+0.3
3,265,538	+		Sama_2731	0.62	+0.4
3,265,539	-		Sama_2731	0.62	+0.1
3,265,540	+		Sama_2731	0.63	+1.4
3,265,540	+		Sama_2731	0.63	-0.3
3,265,540	+		Sama_2731	0.63	+1.5
3,265,541	-		Sama_2731	0.63	+0.2
3,265,541	-		Sama_2731	0.63	+3.4
3,265,541	-		Sama_2731	0.63	+1.1
3,265,549	+		Sama_2731	0.64	-1.3
3,265,549	+		Sama_2731	0.64	-0.3
3,265,549	+		Sama_2731	0.64	-1.8
3,265,549	+		Sama_2731	0.64	-0.5
3,265,549	+		Sama_2731	0.64	-0.0
3,265,550	-		Sama_2731	0.64	-1.1
3,265,550	-		Sama_2731	0.64	-0.7
3,265,550	-		Sama_2731	0.64	+0.3
3,265,611	+		Sama_2731	0.72	+0.7
3,265,611	+		Sama_2731	0.72	-0.5
3,265,739	-		Sama_2731	0.88	-0.9
3,265,745	+		Sama_2731	0.89	+1.7
3,265,749	+		Sama_2731	0.89	+1.2
3,265,750	-		Sama_2731	0.89	+0.6
3,265,750	-		Sama_2731	0.89	+0.6
3,265,750	-		Sama_2731	0.89	-1.9
3,265,750	-		Sama_2731	0.89	-0.3
3,265,757	+				+1.3
3,265,757	+				-0.7
3,265,806	+				+0.6
3,265,806	+				+0.2
3,265,806	+				+0.8
3,265,806	+				+0.7
3,265,807	-				+2.1
3,265,807	-				+0.1
3,265,812	+				-0.6
3,265,812	+				+1.2
3,265,812	+				+0.6
3,265,832	+				+0.3
3,265,833	-				+0.1
3,265,833	-				+2.1
3,265,833	-				-3.3
3,265,842	-				-1.0
3,265,860	+				-1.3
3,265,861	-				-0.7
3,265,877	-				-0.2
3,265,877	-				-1.5
3,265,906	-				-1.1
3,265,909	+				-1.8
3,265,909	+				-0.7
3,265,910	-				+2.7
3,265,940	+				-1.1
3,265,941	-				-0.9
3,265,970	-				+1.3
3,265,970	-				-0.8
3,265,970	-				-1.5
3,265,980	+				+0.2
3,265,980	+				-0.1
3,265,980	+				-0.9
3,265,981	-				-1.3
3,265,981	-				+3.5
3,266,011	+				-2.5
3,266,011	+				-0.3
3,266,012	-				-0.7
3,266,067	+		Sama_2732	0.15	-0.3
3,266,068	-		Sama_2732	0.15	-1.7
3,266,068	-		Sama_2732	0.15	-0.4
3,266,072	+		Sama_2732	0.16	-0.9
3,266,072	+		Sama_2732	0.16	+0.2
3,266,072	+		Sama_2732	0.16	+1.0
3,266,073	-		Sama_2732	0.16	-1.3
3,266,107	+		Sama_2732	0.22	+2.7
3,266,107	+		Sama_2732	0.22	-2.3
3,266,107	+		Sama_2732	0.22	-1.1
3,266,108	-		Sama_2732	0.22	-0.3
3,266,315	-		Sama_2732	0.58	+0.9
3,266,315	-		Sama_2732	0.58	-0.7
3,266,398	-		Sama_2732	0.73	-1.3
3,266,441	-		Sama_2732	0.81	+0.4
3,266,441	-		Sama_2732	0.81	-1.4
3,266,441	-		Sama_2732	0.81	-1.8
3,266,460	+		Sama_2732	0.84	-0.9
3,266,460	+		Sama_2732	0.84	-1.1
3,266,461	-		Sama_2732	0.84	-0.1
3,266,486	-		Sama_2732	0.88	-1.8
3,266,486	-		Sama_2732	0.88	-1.1
3,266,531	+				+0.3
3,266,534	+				+0.1
3,266,534	+				-0.4
3,266,535	-				-0.9
3,266,542	+				-1.1
3,266,543	-				+0.3
3,266,543	-				-0.9
3,266,557	+				+0.6
3,266,588	+				-0.6
3,266,588	+				-2.1
3,266,588	+				+0.5
3,266,589	-				+1.4
3,266,601	+				+0.1
3,266,601	+				-1.3
3,266,602	-				+0.5
3,266,602	-				+2.0
3,266,621	+				-0.7
3,266,689	+		Sama_2733	0.25	-1.7
3,266,689	+		Sama_2733	0.25	-2.1
3,266,689	+		Sama_2733	0.25	+0.3
3,266,689	+		Sama_2733	0.25	-0.8
3,266,690	-		Sama_2733	0.25	-1.4
3,266,690	-		Sama_2733	0.25	-0.3
3,266,721	+		Sama_2733	0.33	+0.9
3,266,721	+		Sama_2733	0.33	+0.1
3,266,722	-		Sama_2733	0.33	+0.4
3,266,722	-		Sama_2733	0.33	+0.1
3,266,743	+		Sama_2733	0.38	-0.0
3,266,744	-		Sama_2733	0.38	-1.3
3,266,744	-		Sama_2733	0.38	-0.0
3,266,763	+		Sama_2733	0.43	+0.8
3,266,807	-		Sama_2733	0.54	+1.0
3,266,865	-		Sama_2733	0.68	+1.8
3,266,902	+		Sama_2733	0.77	+1.1
3,266,902	+		Sama_2733	0.77	+1.8
3,266,902	+		Sama_2733	0.77	+0.2
3,266,902	+		Sama_2733	0.77	+1.7
3,266,902	+		Sama_2733	0.77	+0.9
3,266,903	-		Sama_2733	0.77	-1.0
3,266,903	-		Sama_2733	0.77	-0.9
3,266,940	+		Sama_2733	0.87	+0.8
3,266,940	+		Sama_2733	0.87	-2.3
3,266,940	+		Sama_2733	0.87	-0.4
3,266,940	+		Sama_2733	0.87	-1.7
3,266,940	+		Sama_2733	0.87	+1.8
3,266,940	+		Sama_2733	0.87	-0.8
3,266,940	+		Sama_2733	0.87	-0.0
3,266,940	+		Sama_2733	0.87	+1.2
3,266,941	-		Sama_2733	0.87	-0.5
3,266,941	-		Sama_2733	0.87	-0.1
3,266,941	-		Sama_2733	0.87	-1.9
3,266,950	-		Sama_2733	0.89	-0.4
3,266,968	+				-0.5
3,266,968	+				+2.3
3,266,968	+				+3.1
3,266,968	+				-1.7
3,266,968	+				-0.7
3,266,968	+				+1.2
3,266,968	+				+0.1
3,266,968	+				-0.4
3,266,968	+				+0.1
3,266,968	+				-0.9
3,266,968	+				+0.5
3,266,968	+				-1.9
3,266,968	+				+1.0
3,266,968	+				-1.5
3,266,969	-				+0.4
3,266,969	-				-0.5
3,266,969	-				+0.1
3,266,969	-				-1.2
3,266,969	-				-1.1
3,266,969	-				-1.3
3,266,969	-				+0.2
3,266,969	-				+0.1
3,266,969	-				+0.7
3,266,969	-				-1.3
3,266,969	-				+0.7
3,266,969	-				-1.2
3,266,969	-				+1.4
3,266,969	-				+1.1
3,266,969	-				+0.2
3,266,969	-				+1.6
3,266,969	-				-1.3
3,266,970	+				-0.5
3,266,970	+				+0.2
3,266,970	+				-2.9
3,266,970	+				+0.1
3,266,971	-				+1.7
3,266,971	-				+0.1
3,266,971	-				+1.3
3,266,971	-				-1.1
3,266,971	-				-1.8
3,266,971	-				-0.7
3,266,971	-				+2.7
3,266,972	+				+0.7
3,266,972	+				+0.6
3,266,972	+				-1.5
3,266,972	+				-0.9
3,266,972	+				+0.3
3,266,972	+				-0.3
3,266,972	+				-1.3
3,266,972	+				-2.3
3,266,972	+				+0.2
3,266,972	+				-0.2
3,266,972	+				+1.8
3,266,972	+				-2.0
3,266,972	+				+1.2
3,266,972	+				-0.3
3,266,972	+				-0.7
3,266,972	+				-0.1
3,266,972	+				+0.4
3,266,972	+				+0.1
3,266,972	+				-0.5
3,266,972	+				-2.2
3,266,972	+				-1.6
3,266,972	+				-0.7
3,266,973	-				-0.3
3,266,973	-				-0.4
3,266,973	-				-2.5
3,266,973	-				-0.8
3,266,973	-				-2.1
3,266,973	-				-1.3
3,266,973	-				+0.7
3,266,973	-				-1.1
3,266,973	-				+0.4
3,266,973	-				-2.3
3,266,973	-				-2.1
3,266,973	-				-0.5
3,266,973	-				+0.7
3,266,973	-				+2.2
3,266,973	-				+0.5
3,266,973	-				+0.4
3,266,973	-				-1.8
3,266,973	-				+0.4
3,266,973	-				+0.1
3,266,973	-				-0.2
3,266,973	-				-1.7
3,266,973	-				+0.7
3,266,973	-				+3.7
3,266,973	-				+1.1
3,267,124	+				-0.7
3,267,233	+		Sama_2734	0.20	-3.0
3,267,234	-		Sama_2734	0.20	+0.9
3,267,234	-		Sama_2734	0.20	-1.0
3,267,313	+		Sama_2734	0.28	+1.3
3,267,314	-		Sama_2734	0.28	-0.1
3,267,345	+		Sama_2734	0.31	+2.4
3,267,345	+		Sama_2734	0.31	-1.8
3,267,345	+		Sama_2734	0.31	-1.1
3,267,345	+		Sama_2734	0.31	-0.2
3,267,346	-		Sama_2734	0.31	-0.8
3,267,346	-		Sama_2734	0.31	-2.0
3,267,346	-		Sama_2734	0.31	+0.9
3,267,352	+		Sama_2734	0.32	+1.7
3,267,449	-		Sama_2734	0.41	-1.8
3,267,548	+		Sama_2734	0.50	-1.1
3,267,548	+		Sama_2734	0.50	-0.5
3,267,548	+		Sama_2734	0.50	-0.7