Strain Fitness in Shewanella amazonensis SB2B around Sama_2418

Experiment: Motility assay, center cut sample 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 2
2,909,202	+		Sama_2417	0.64	+0.9
2,909,257	+		Sama_2417	0.66	+1.4
2,909,257	+		Sama_2417	0.66	+1.8
2,909,257	+		Sama_2417	0.66	-2.3
2,909,257	+		Sama_2417	0.66	+2.3
2,909,257	+		Sama_2417	0.66	+0.1
2,909,257	+		Sama_2417	0.66	+1.2
2,909,257	+		Sama_2417	0.66	-2.9
2,909,257	+		Sama_2417	0.66	-1.2
2,909,258	-		Sama_2417	0.66	+2.5
2,909,259	+		Sama_2417	0.66	+0.8
2,909,259	+		Sama_2417	0.66	-0.3
2,909,259	+		Sama_2417	0.66	+0.0
2,909,259	+		Sama_2417	0.66	+3.7
2,909,260	-		Sama_2417	0.66	+1.8
2,909,260	-		Sama_2417	0.66	+2.0
2,909,315	+		Sama_2417	0.69	-0.1
2,909,338	+		Sama_2417	0.70	+1.3
2,909,339	-		Sama_2417	0.70	+2.5
2,909,339	-		Sama_2417	0.70	+0.9
2,909,359	-		Sama_2417	0.71	+1.1
2,909,365	+		Sama_2417	0.71	-1.3
2,909,472	+		Sama_2417	0.76	+0.2
2,909,472	+		Sama_2417	0.76	+0.1
2,909,472	+		Sama_2417	0.76	-2.7
2,909,472	+		Sama_2417	0.76	+0.7
2,909,472	+		Sama_2417	0.76	+0.7
2,909,472	+		Sama_2417	0.76	+0.1
2,909,472	+		Sama_2417	0.76	+1.0
2,909,472	+		Sama_2417	0.76	+0.1
2,909,472	+		Sama_2417	0.76	+0.4
2,909,473	-		Sama_2417	0.76	+1.6
2,909,473	-		Sama_2417	0.76	+0.1
2,909,473	-		Sama_2417	0.76	-1.7
2,909,473	-		Sama_2417	0.76	+3.1
2,909,473	-		Sama_2417	0.76	+3.8
2,909,501	-		Sama_2417	0.77	+1.5
2,909,532	+		Sama_2417	0.79	+1.2
2,909,532	+		Sama_2417	0.79	-2.0
2,909,567	+		Sama_2417	0.80	-1.8
2,909,567	+		Sama_2417	0.80	-0.7
2,909,567	+		Sama_2417	0.80	+0.3
2,909,567	+		Sama_2417	0.80	-0.4
2,909,568	-		Sama_2417	0.81	+0.4
2,909,568	-		Sama_2417	0.81	+0.7
2,909,568	-		Sama_2417	0.81	-0.9
2,909,568	-		Sama_2417	0.81	+0.5
2,909,571	+		Sama_2417	0.81	+0.9
2,909,572	-		Sama_2417	0.81	+2.8
2,909,572	-		Sama_2417	0.81	+2.5
2,909,572	-		Sama_2417	0.81	+2.3
2,909,572	-		Sama_2417	0.81	+2.8
2,909,572	-		Sama_2417	0.81	+1.1
2,909,575	-		Sama_2417	0.81	+0.9
2,909,575	-		Sama_2417	0.81	+1.0
2,909,588	-		Sama_2417	0.81	+1.9
2,909,595	+		Sama_2417	0.82	+0.1
2,909,596	-		Sama_2417	0.82	+2.7
2,909,611	+		Sama_2417	0.83	+0.7
2,909,611	+		Sama_2417	0.83	+3.2
2,909,611	+		Sama_2417	0.83	+0.7
2,909,611	+		Sama_2417	0.83	+1.9
2,909,611	+		Sama_2417	0.83	-0.2
2,909,611	+		Sama_2417	0.83	+3.2
2,909,612	-		Sama_2417	0.83	+0.3
2,909,612	-		Sama_2417	0.83	+0.7
2,909,612	-		Sama_2417	0.83	+2.5
2,909,612	-		Sama_2417	0.83	+1.7
2,909,612	-		Sama_2417	0.83	+1.3
2,909,612	-		Sama_2417	0.83	+0.9
2,909,689	+		Sama_2417	0.86	+1.5
2,909,690	-		Sama_2417	0.86	+1.6
2,909,692	+		Sama_2417	0.86	-3.1
2,909,743	+		Sama_2417	0.89	+0.2
2,909,743	+		Sama_2417	0.89	+0.9
2,909,743	+		Sama_2417	0.89	-0.1
2,909,743	+		Sama_2417	0.89	-1.5
2,909,744	-		Sama_2417	0.89	+1.8
2,909,744	-		Sama_2417	0.89	+0.9
2,909,745	+		Sama_2417	0.89	-0.2
2,909,745	+		Sama_2417	0.89	+0.8
2,909,745	+		Sama_2417	0.89	+0.7
2,909,745	+		Sama_2417	0.89	-0.3
2,909,745	+		Sama_2417	0.89	+0.1
2,909,745	+		Sama_2417	0.89	-1.6
2,909,745	+		Sama_2417	0.89	-1.9
2,909,745	+		Sama_2417	0.89	+0.5
2,909,745	+		Sama_2417	0.89	+0.3
2,909,745	+		Sama_2417	0.89	+1.8
2,909,745	+		Sama_2417	0.89	+0.1
2,909,745	+		Sama_2417	0.89	-0.6
2,909,745	+		Sama_2417	0.89	-1.3
2,909,745	+		Sama_2417	0.89	+1.7
2,909,745	+		Sama_2417	0.89	+0.7
2,909,746	-		Sama_2417	0.89	+2.5
2,909,746	-		Sama_2417	0.89	+1.5
2,909,746	-		Sama_2417	0.89	+0.1
2,909,746	-		Sama_2417	0.89	+0.1
2,909,746	-		Sama_2417	0.89	+1.1
2,909,746	-		Sama_2417	0.89	+0.8
2,909,746	-		Sama_2417	0.89	+2.9
2,909,746	-		Sama_2417	0.89	+0.3
2,909,746	-		Sama_2417	0.89	+1.0
2,909,746	-		Sama_2417	0.89	+1.7
2,909,746	-		Sama_2417	0.89	+2.4
2,909,746	-		Sama_2417	0.89	-0.4
2,909,751	+		Sama_2417	0.89	-1.2
2,909,751	+		Sama_2417	0.89	+0.9
2,909,751	+		Sama_2417	0.89	+3.3
2,909,752	-		Sama_2417	0.89	+4.0
2,909,804	+				-0.7
2,909,805	-				+0.9
2,909,805	-				+0.8
2,909,805	-				+0.1
2,909,805	-				+2.7
2,909,814	+				+0.3
2,909,814	+				+0.1
2,909,815	-				-2.0
2,909,861	+				-1.2
2,909,861	+				-1.2
2,909,861	+				-1.7
2,909,861	+				-0.4
2,909,862	-				-0.8
2,909,866	-				+0.1
2,909,866	-				+1.6
2,909,866	-				+2.3
2,909,866	-				+1.6
2,909,926	+				-0.3
2,909,926	+				+0.3
2,909,927	-				+0.0
2,909,977	-				-1.6
2,909,980	+				-0.9
2,909,981	-				+0.3
2,910,001	+				-1.4
2,910,002	-				+5.8
2,910,023	+				+1.0
2,910,023	+				+2.7
2,910,024	-				+2.2
2,910,167	-				+5.1
2,910,182	-				+2.7
2,910,319	+		Sama_2418	0.12	+7.2
2,910,320	-		Sama_2418	0.12	+5.6
2,910,335	+		Sama_2418	0.13	+6.2
2,910,336	-		Sama_2418	0.13	+4.7
2,910,340	-		Sama_2418	0.14	+1.1
2,910,340	-		Sama_2418	0.14	+3.7
2,910,340	-		Sama_2418	0.14	+5.9
2,910,368	+		Sama_2418	0.15	+6.0
2,910,402	+		Sama_2418	0.18	+3.9
2,910,403	-		Sama_2418	0.18	+6.3
2,910,455	-		Sama_2418	0.21	+5.4
2,910,455	-		Sama_2418	0.21	+4.7
2,910,455	-		Sama_2418	0.21	+6.6
2,910,457	+		Sama_2418	0.21	+5.4
2,910,514	-		Sama_2418	0.25	+5.6
2,910,558	+		Sama_2418	0.28	+7.7
2,910,558	+		Sama_2418	0.28	+6.1
2,910,558	+		Sama_2418	0.28	+5.7
2,910,558	+		Sama_2418	0.28	+5.4
2,910,558	+		Sama_2418	0.28	-1.3
2,910,559	-		Sama_2418	0.28	+5.6
2,910,559	-		Sama_2418	0.28	+8.3
2,910,559	-		Sama_2418	0.28	+6.0
2,910,559	-		Sama_2418	0.28	+6.5
2,910,559	-		Sama_2418	0.28	+5.8
2,910,559	-		Sama_2418	0.28	+6.8
2,910,561	-		Sama_2418	0.28	+5.9
2,910,561	-		Sama_2418	0.28	+6.3
2,910,601	+		Sama_2418	0.30	+7.8
2,910,602	-		Sama_2418	0.30	+1.8
2,910,602	-		Sama_2418	0.30	+7.2
2,910,602	-		Sama_2418	0.30	+6.3
2,910,602	-		Sama_2418	0.30	+3.7
2,910,618	-		Sama_2418	0.31	-0.7
2,910,757	+		Sama_2418	0.40	+7.9
2,910,758	-		Sama_2418	0.40	+3.1
2,910,758	-		Sama_2418	0.40	+5.2
2,910,784	-		Sama_2418	0.42	+7.9
2,910,784	-		Sama_2418	0.42	+0.2
2,910,794	-		Sama_2418	0.43	+5.9
2,910,794	-		Sama_2418	0.43	+3.9
2,910,794	-		Sama_2418	0.43	+6.5
2,910,812	+		Sama_2418	0.44	+7.2
2,910,852	+		Sama_2418	0.46	+6.2
2,910,852	+		Sama_2418	0.46	+7.5
2,910,852	+		Sama_2418	0.46	+4.7
2,910,852	+		Sama_2418	0.46	+5.0
2,910,853	-		Sama_2418	0.46	+5.3
2,910,903	+		Sama_2418	0.50	+3.8
2,910,903	+		Sama_2418	0.50	+0.8
2,910,903	+		Sama_2418	0.50	+5.8
2,910,903	+		Sama_2418	0.50	+5.9
2,910,903	+		Sama_2418	0.50	+6.3
2,910,904	-		Sama_2418	0.50	+6.6
2,910,904	-		Sama_2418	0.50	+5.1
2,910,904	-		Sama_2418	0.50	+6.1
2,910,904	-		Sama_2418	0.50	+3.8
2,910,905	+		Sama_2418	0.50	+5.9
2,910,905	+		Sama_2418	0.50	+0.1
2,910,906	-		Sama_2418	0.50	+8.7
2,910,911	+		Sama_2418	0.50	+8.0
2,910,912	-		Sama_2418	0.50	+6.8
2,910,912	-		Sama_2418	0.50	+5.2
2,910,912	-		Sama_2418	0.50	+4.9
2,910,971	+		Sama_2418	0.54	+6.5
2,910,988	+		Sama_2418	0.55	+6.4
2,911,010	+		Sama_2418	0.57	+5.3
2,911,010	+		Sama_2418	0.57	+4.4
2,911,010	+		Sama_2418	0.57	+2.5
2,911,164	+		Sama_2418	0.66	+4.7
2,911,164	+		Sama_2418	0.66	+1.7
2,911,165	-		Sama_2418	0.67	+5.7
2,911,166	+		Sama_2418	0.67	+5.8
2,911,166	+		Sama_2418	0.67	+5.6
2,911,166	+		Sama_2418	0.67	+4.6
2,911,167	-		Sama_2418	0.67	+0.8
2,911,167	-		Sama_2418	0.67	+6.1
2,911,202	-		Sama_2418	0.69	+6.7
2,911,209	-		Sama_2418	0.69	-1.2
2,911,283	+		Sama_2418	0.74	+5.5
2,911,283	+		Sama_2418	0.74	+3.6
2,911,284	-		Sama_2418	0.74	+6.2
2,911,284	-		Sama_2418	0.74	+7.0
2,911,315	+		Sama_2418	0.76	+5.0
2,911,315	+		Sama_2418	0.76	+3.2
2,911,315	+		Sama_2418	0.76	+8.3
2,911,316	-		Sama_2418	0.76	+7.1
2,911,316	-		Sama_2418	0.76	+7.0
2,911,341	-		Sama_2418	0.78	+5.5
2,911,381	+		Sama_2418	0.80	+4.1
2,911,382	-		Sama_2418	0.80	+4.4
2,911,469	-		Sama_2418	0.86	+6.1
2,911,469	-		Sama_2418	0.86	+4.8
2,911,469	-		Sama_2418	0.86	+5.1
2,911,476	-		Sama_2418	0.87	+6.5
2,911,483	+		Sama_2418	0.87	+5.1
2,911,484	-		Sama_2418	0.87	+8.7
2,911,516	+		Sama_2418	0.89	+5.6
2,911,553	+				+3.6
2,911,553	+				+7.8
2,911,553	+				+5.3
2,911,560	-				+6.9
2,911,639	-				+4.4
2,911,639	-				+0.7
2,911,684	-				+0.5
2,911,684	-				+0.5
2,911,699	+				-0.3
2,911,699	+				+0.9
2,911,731	+				+0.8
2,911,731	+				-0.9
2,911,731	+				-2.2
2,911,732	-				-1.7
2,911,732	-				-0.0
2,911,732	-				-1.3
2,911,732	-				+0.4
2,911,736	+				-1.3
2,911,736	+				+0.8
2,911,737	-				-0.7
2,911,758	+				-0.4
2,911,759	-				+0.2
2,911,759	-				+0.4
2,911,823	-				+1.3
2,911,823	-				+0.7
2,911,823	-				-0.7
2,911,904	-		Sama_2419	0.13	-2.0
2,911,924	-		Sama_2419	0.14	+0.1
2,911,959	+		Sama_2419	0.17	+1.4
2,911,959	+		Sama_2419	0.17	+2.0
2,911,960	-		Sama_2419	0.17	-0.7
2,911,960	-		Sama_2419	0.17	-1.3
2,911,960	-		Sama_2419	0.17	+0.8
2,911,960	-		Sama_2419	0.17	+2.2
2,912,047	+		Sama_2419	0.23	-1.5
2,912,048	-		Sama_2419	0.23	+1.1
2,912,062	+		Sama_2419	0.24	-0.3
2,912,062	+		Sama_2419	0.24	+0.1
2,912,062	+		Sama_2419	0.24	+0.7
2,912,063	-		Sama_2419	0.24	+0.7
2,912,063	-		Sama_2419	0.24	+1.5
2,912,063	-		Sama_2419	0.24	-1.2
2,912,063	-		Sama_2419	0.24	-0.7
2,912,063	-		Sama_2419	0.24	+1.2
2,912,125	-		Sama_2419	0.29	-1.0
2,912,196	+		Sama_2419	0.34	-1.3
2,912,197	-		Sama_2419	0.34	+0.5
2,912,197	-		Sama_2419	0.34	+0.1
2,912,197	-		Sama_2419	0.34	-0.3
2,912,197	-		Sama_2419	0.34	-0.7
2,912,213	-		Sama_2419	0.35	+2.4
2,912,218	+		Sama_2419	0.36	+1.3
2,912,236	+		Sama_2419	0.37	+0.0
2,912,263	-		Sama_2419	0.39	-2.4
2,912,337	+		Sama_2419	0.45	+1.7
2,912,337	+		Sama_2419	0.45	+0.9
2,912,337	+		Sama_2419	0.45	+1.3
2,912,337	+		Sama_2419	0.45	+1.7
2,912,338	-		Sama_2419	0.45	-2.5
2,912,338	-		Sama_2419	0.45	-0.3
2,912,338	-		Sama_2419	0.45	-0.9
2,912,338	-		Sama_2419	0.45	+0.3
2,912,353	+		Sama_2419	0.46	+1.0
2,912,354	-		Sama_2419	0.46	+1.5
2,912,354	-		Sama_2419	0.46	+1.8
2,912,354	-		Sama_2419	0.46	-1.7
2,912,354	-		Sama_2419	0.46	+0.6
2,912,354	-		Sama_2419	0.46	-2.0
2,912,354	-		Sama_2419	0.46	-2.7
2,912,376	+		Sama_2419	0.47	+0.1
2,912,379	+		Sama_2419	0.48	+0.9
2,912,423	+		Sama_2419	0.51	+2.1
2,912,424	-		Sama_2419	0.51	-1.3
2,912,477	+		Sama_2419	0.55	-2.2
2,912,478	-		Sama_2419	0.55	-2.0
2,912,521	+		Sama_2419	0.58	-2.9
2,912,521	+		Sama_2419	0.58	+4.5
2,912,522	-		Sama_2419	0.58	+0.6
2,912,522	-		Sama_2419	0.58	-0.8
2,912,522	-		Sama_2419	0.58	+1.4
2,912,522	-		Sama_2419	0.58	-0.9
2,912,522	-		Sama_2419	0.58	-0.9
2,912,525	+		Sama_2419	0.58	+2.1
2,912,533	-		Sama_2419	0.59	+0.8
2,912,533	-		Sama_2419	0.59	-0.3
2,912,534	+		Sama_2419	0.59	+0.6
2,912,535	-		Sama_2419	0.59	+0.6
2,912,561	+		Sama_2419	0.61	+1.4
2,912,561	+		Sama_2419	0.61	-1.4
2,912,561	+		Sama_2419	0.61	-0.9
2,912,561	+		Sama_2419	0.61	+1.4
2,912,562	-		Sama_2419	0.61	-0.9
2,912,562	-		Sama_2419	0.61	-1.3
2,912,562	-		Sama_2419	0.61	-2.0
2,912,562	-		Sama_2419	0.61	-0.7
2,912,576	+		Sama_2419	0.62	+3.2
2,912,577	-		Sama_2419	0.62	+2.0
2,912,606	-		Sama_2419	0.64	-0.5
2,912,606	-		Sama_2419	0.64	+1.3
2,912,606	-		Sama_2419	0.64	-1.3
2,912,606	-		Sama_2419	0.64	-0.9
2,912,661	+		Sama_2419	0.69	+1.5
2,912,662	-		Sama_2419	0.69	-0.3
2,912,662	-		Sama_2419	0.69	+0.2
2,912,662	-		Sama_2419	0.69	+0.8
2,912,662	-		Sama_2419	0.69	-1.4
2,912,665	+		Sama_2419	0.69	+0.5