Strain Fitness in Shewanella amazonensis SB2B around Sama_2332

Experiment: Motility assay, center cut sample 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 2
2,797,268	+		Sama_2331	0.23	-2.4
2,797,280	-		Sama_2331	0.24	-1.2
2,797,303	+		Sama_2331	0.27	-2.4
2,797,426	-		Sama_2331	0.39	-0.7
2,797,456	-		Sama_2331	0.42	-3.9
2,797,456	-		Sama_2331	0.42	+0.1
2,797,506	+		Sama_2331	0.47	-1.7
2,797,536	+		Sama_2331	0.50	-1.5
2,797,545	+		Sama_2331	0.51	-2.4
2,797,545	+		Sama_2331	0.51	-2.7
2,797,546	-		Sama_2331	0.51	-0.9
2,797,584	+		Sama_2331	0.55	-2.4
2,797,585	-		Sama_2331	0.55	+0.1
2,797,590	+		Sama_2331	0.55	-2.2
2,797,591	-		Sama_2331	0.55	-2.8
2,797,630	+		Sama_2331	0.59	-0.0
2,797,630	+		Sama_2331	0.59	-2.4
2,797,630	+		Sama_2331	0.59	-1.4
2,797,668	+		Sama_2331	0.63	-0.4
2,797,668	+		Sama_2331	0.63	-0.7
2,797,668	+		Sama_2331	0.63	-1.5
2,797,668	+		Sama_2331	0.63	-2.9
2,797,699	+		Sama_2331	0.66	-2.2
2,797,699	+		Sama_2331	0.66	-3.1
2,797,700	-		Sama_2331	0.66	-2.4
2,797,700	-		Sama_2331	0.66	-0.4
2,797,700	-		Sama_2331	0.66	-0.4
2,797,700	-		Sama_2331	0.66	-2.3
2,797,717	+		Sama_2331	0.68	-2.7
2,797,894	+		Sama_2331	0.86	-1.7
2,797,894	+		Sama_2331	0.86	-0.7
2,797,894	+		Sama_2331	0.86	-0.7
2,797,895	-		Sama_2331	0.86	-2.5
2,797,898	+		Sama_2331	0.86	-1.4
2,797,898	+		Sama_2331	0.86	-1.5
2,797,898	+		Sama_2331	0.86	-0.9
2,797,899	-		Sama_2331	0.86	-2.9
2,797,899	-		Sama_2331	0.86	-2.6
2,797,899	-		Sama_2331	0.86	-1.8
2,797,900	+		Sama_2331	0.86	-0.9
2,797,900	+		Sama_2331	0.86	-1.8
2,797,901	-		Sama_2331	0.86	-1.8
2,797,930	+		Sama_2331	0.89	-4.0
2,797,930	+		Sama_2331	0.89	-1.8
2,797,986	+				-1.4
2,797,986	+				-1.5
2,798,034	-				-0.7
2,798,129	+				-3.1
2,798,129	+				-1.5
2,798,129	+				-2.4
2,798,129	+				-1.5
2,798,324	+		Sama_2332	0.25	-0.4
2,798,324	+		Sama_2332	0.25	+1.6
2,798,324	+		Sama_2332	0.25	-3.4
2,798,334	-		Sama_2332	0.26	-2.9
2,798,348	-		Sama_2332	0.27	-1.2
2,798,391	-		Sama_2332	0.31	-1.8
2,798,391	-		Sama_2332	0.31	-2.3
2,798,500	+		Sama_2332	0.40	+0.6
2,798,500	+		Sama_2332	0.40	-1.7
2,798,547	+		Sama_2332	0.44	-1.5
2,798,621	+		Sama_2332	0.50	-2.3
2,798,621	+		Sama_2332	0.50	-1.4
2,798,621	+		Sama_2332	0.50	-1.2
2,798,621	+		Sama_2332	0.50	-3.5
2,798,621	+		Sama_2332	0.50	-0.2
2,798,622	-		Sama_2332	0.50	-3.1
2,798,622	-		Sama_2332	0.50	-0.7
2,798,629	-		Sama_2332	0.51	-0.9
2,798,655	+		Sama_2332	0.53	-3.1
2,798,736	-		Sama_2332	0.60	-1.7
2,798,797	-		Sama_2332	0.65	-0.7
2,798,847	+		Sama_2332	0.70	-2.1
2,798,883	-		Sama_2332	0.73	-2.1
2,798,887	+		Sama_2332	0.73	-2.6
2,798,888	-		Sama_2332	0.73	+0.1
2,798,888	-		Sama_2332	0.73	-1.9
2,798,903	+		Sama_2332	0.74	-2.7
2,798,904	-		Sama_2332	0.74	-2.9
2,798,908	-		Sama_2332	0.75	-3.3
2,798,948	+		Sama_2332	0.78	-3.1
2,798,952	+		Sama_2332	0.79	-2.2
2,798,953	-		Sama_2332	0.79	-1.2
2,799,005	+		Sama_2332	0.83	-0.4
2,799,005	+		Sama_2332	0.83	-2.4
2,799,044	+		Sama_2332	0.86	-1.7
2,799,044	+		Sama_2332	0.86	-2.3
2,799,114	+				+0.1
2,799,160	-				-1.4
2,799,165	-				-3.3
2,799,165	-				-2.4
2,799,202	+				-1.4
2,799,231	+				-3.2
2,799,248	+				-0.9
2,799,249	-				-1.4
2,799,251	+				-1.5
2,799,302	-		Sama_2333	0.12	-1.5
2,799,310	-		Sama_2333	0.13	-1.5
2,799,310	-		Sama_2333	0.13	-3.1
2,799,427	-		Sama_2333	0.25	-0.2
2,799,459	-		Sama_2333	0.28	+5.2
2,799,507	+		Sama_2333	0.33	-2.5
2,799,532	-		Sama_2333	0.35	-2.7
2,799,568	-		Sama_2333	0.39	-3.0
2,799,705	-		Sama_2333	0.53	-2.4
2,799,765	-		Sama_2333	0.59	-1.4
2,799,898	+		Sama_2333	0.72	-1.8
2,799,940	+		Sama_2333	0.77	-2.7
2,799,941	-		Sama_2333	0.77	-0.7
2,799,941	-		Sama_2333	0.77	+0.1
2,800,028	-		Sama_2333	0.85	-1.4
2,800,031	+		Sama_2333	0.86	-1.4
2,800,060	+		Sama_2333	0.89	-1.5
2,800,077	+				-1.7
2,800,085	-				-1.4
2,800,089	+				+0.6
2,800,090	-				-0.7
2,800,096	+				-2.9
2,800,097	-				-0.7
2,800,132	-				-2.1
2,800,132	-				-2.1