Strain Fitness in Shewanella amazonensis SB2B around Sama_2262

Experiment: Motility assay, center cut sample 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 2
2,725,695	-				-0.2
2,725,695	-				+1.6
2,726,823	-				-3.1
2,726,843	-				+1.7
2,726,843	-				-1.2
2,726,843	-				+1.1
2,726,843	-				+0.3
2,726,843	-				-1.7
2,726,847	-				+0.1
2,726,847	-				-0.5
2,726,867	-				+1.3
2,726,889	-				+3.4
2,726,889	-				-0.6
2,726,896	-				-0.6
2,726,903	-				+0.8
2,726,903	-				+0.5
2,726,910	-				+2.0
2,726,917	-				-0.4
2,726,987	-				+1.4
2,726,987	-				-0.4
2,726,987	-				+1.7
2,727,120	-		Sama_2263	0.40	-0.4
2,727,122	-		Sama_2263	0.41	+2.6
2,727,122	-		Sama_2263	0.41	+0.4
2,727,166	-		Sama_2263	0.52	-0.7
2,727,216	-		Sama_2263	0.65	+0.8
2,727,226	-		Sama_2263	0.68	-1.5
2,727,259	-		Sama_2263	0.76	+2.0
2,727,283	-		Sama_2263	0.82	-1.9
2,727,293	-		Sama_2263	0.85	+1.2
2,727,293	-		Sama_2263	0.85	+0.2
2,727,364	-				+1.6
2,727,364	-				+0.5
2,727,381	-				+1.6
2,727,381	-				+2.2
2,727,388	-				+0.1
2,727,388	-				+1.2
2,727,388	-				+0.1
2,727,388	-				+0.3
2,727,388	-				-0.8
2,727,395	-				-0.9
2,727,395	-				+1.2
2,727,402	-				-0.0
2,727,506	+				+4.0
2,727,507	-				+1.6
2,727,507	-				+1.3
2,727,560	-				-0.3
2,727,560	-				-0.1
2,727,567	-				-0.7
2,727,594	-				-0.9