Strain Fitness in Shewanella amazonensis SB2B around Sama_2137

Experiment: Motility assay, center cut sample 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 2
2,582,246	-		Sama_2136	0.42	-0.5
2,582,246	-		Sama_2136	0.42	-1.4
2,582,307	-		Sama_2136	0.46	-0.6
2,582,320	+		Sama_2136	0.47	+1.5
2,582,321	-		Sama_2136	0.47	+0.8
2,582,321	-		Sama_2136	0.47	+0.4
2,582,358	-		Sama_2136	0.50	+0.7
2,582,448	+		Sama_2136	0.57	+0.0
2,582,448	+		Sama_2136	0.57	+0.5
2,582,448	+		Sama_2136	0.57	-0.2
2,582,448	+		Sama_2136	0.57	-1.6
2,582,449	-		Sama_2136	0.57	+1.3
2,582,449	-		Sama_2136	0.57	+1.0
2,582,449	-		Sama_2136	0.57	+1.4
2,582,449	-		Sama_2136	0.57	-1.7
2,582,456	+		Sama_2136	0.58	+1.3
2,582,457	-		Sama_2136	0.58	-1.6
2,582,459	-		Sama_2136	0.58	+0.3
2,582,505	+		Sama_2136	0.61	-1.5
2,582,515	-		Sama_2136	0.62	-0.9
2,582,515	-		Sama_2136	0.62	-2.0
2,582,515	-		Sama_2136	0.62	+0.0
2,582,515	-		Sama_2136	0.62	+1.7
2,582,515	-		Sama_2136	0.62	-0.6
2,582,559	+		Sama_2136	0.66	-1.7
2,582,559	+		Sama_2136	0.66	-0.7
2,582,559	+		Sama_2136	0.66	+1.2
2,582,559	+		Sama_2136	0.66	+0.4
2,582,560	-		Sama_2136	0.66	+0.6
2,582,560	-		Sama_2136	0.66	-0.2
2,582,560	-		Sama_2136	0.66	-1.6
2,582,629	+		Sama_2136	0.71	-1.6
2,582,629	+		Sama_2136	0.71	+0.3
2,582,654	-		Sama_2136	0.73	+0.4
2,582,654	-		Sama_2136	0.73	-1.5
2,582,654	-		Sama_2136	0.73	-0.4
2,582,654	-		Sama_2136	0.73	-1.9
2,582,654	-		Sama_2136	0.73	-0.9
2,582,902	+				+1.7
2,582,903	-				-1.3
2,582,909	+				+1.6
2,583,047	-				+0.4
2,583,047	-				+0.1
2,583,048	+				-1.3
2,583,048	+				-0.2
2,583,049	-				-0.1
2,583,049	-				-0.9
2,583,049	-				-1.0
2,583,079	-				+1.0
2,583,111	+				-0.9
2,583,111	+				+0.2
2,583,111	+				+0.5
2,583,111	+				-1.7
2,583,111	+				+0.7
2,583,111	+				-1.6
2,583,111	+				+2.1
2,583,112	-				+0.8
2,583,112	-				+0.0
2,583,165	+				+0.4
2,583,165	+				-1.8
2,583,166	-				-2.0
2,583,166	-				-0.9
2,583,240	-				-1.4
2,583,257	+		Sama_2137	0.12	-0.0
2,583,258	-		Sama_2137	0.12	+1.0
2,583,312	-		Sama_2137	0.22	+1.5
2,583,320	+		Sama_2137	0.24	+1.6
2,583,382	+		Sama_2137	0.35	+1.9
2,583,429	+		Sama_2137	0.44	-1.2
2,583,429	+		Sama_2137	0.44	-0.7
2,583,429	+		Sama_2137	0.44	-0.9
2,583,429	+		Sama_2137	0.44	-0.6
2,583,429	+		Sama_2137	0.44	+1.9
2,583,430	-		Sama_2137	0.44	+1.3
2,583,430	-		Sama_2137	0.44	-0.8
2,583,430	-		Sama_2137	0.44	+0.4
2,583,434	+		Sama_2137	0.45	+0.6
2,583,434	+		Sama_2137	0.45	+1.2
2,583,434	+		Sama_2137	0.45	-1.5
2,583,474	+		Sama_2137	0.52	-1.7
2,583,593	+		Sama_2137	0.74	-0.2
2,583,593	+		Sama_2137	0.74	-0.7
2,583,593	+		Sama_2137	0.74	+0.3
2,583,593	+		Sama_2137	0.74	-1.2
2,583,594	-		Sama_2137	0.74	+1.2
2,583,594	-		Sama_2137	0.74	+3.4
2,583,594	-		Sama_2137	0.74	+0.4
2,583,594	-		Sama_2137	0.74	-1.2
2,583,594	-		Sama_2137	0.74	-0.6
2,583,689	+				+2.0
2,583,734	+				-0.4
2,583,735	-				+0.0
2,583,743	-				-0.7
2,583,973	+		Sama_2138	0.79	-0.4
2,583,973	+		Sama_2138	0.79	-0.6
2,583,974	-		Sama_2138	0.79	+0.4
2,583,974	-		Sama_2138	0.79	+0.9
2,583,974	-		Sama_2138	0.79	-2.0
2,583,991	+		Sama_2138	0.85	+2.6
2,584,007	+				+1.0
2,584,007	+				-1.6
2,584,008	-				+1.5
2,584,052	+				+1.4
2,584,119	-		Sama_2139	0.10	+2.0
2,584,188	+		Sama_2139	0.19	-1.2
2,584,188	+		Sama_2139	0.19	-0.8
2,584,189	-		Sama_2139	0.19	+0.5
2,584,197	+		Sama_2139	0.20	+1.7
2,584,197	+		Sama_2139	0.20	+1.0
2,584,198	-		Sama_2139	0.20	+0.0
2,584,416	-		Sama_2139	0.47	-1.7
2,584,423	-		Sama_2139	0.48	-1.7
2,584,455	+		Sama_2139	0.52	-0.7
2,584,455	+		Sama_2139	0.52	-0.3
2,584,455	+		Sama_2139	0.52	-1.2
2,584,456	-		Sama_2139	0.52	-2.2
2,584,490	+		Sama_2139	0.56	-1.2
2,584,519	+		Sama_2139	0.60	-0.5
2,584,519	+		Sama_2139	0.60	-0.2
2,584,519	+		Sama_2139	0.60	-2.0
2,584,519	+		Sama_2139	0.60	+0.5
2,584,519	+		Sama_2139	0.60	+0.7
2,584,520	-		Sama_2139	0.60	+0.1
2,584,520	-		Sama_2139	0.60	-0.9
2,584,520	-		Sama_2139	0.60	-2.0
2,584,661	+		Sama_2139	0.78	-0.7
2,584,665	+		Sama_2139	0.78	-0.6
2,584,665	+		Sama_2139	0.78	+0.6
2,584,665	+		Sama_2139	0.78	+0.7
2,584,665	+		Sama_2139	0.78	-1.4
2,584,666	-		Sama_2139	0.78	-1.4
2,584,666	-		Sama_2139	0.78	+0.5
2,584,666	-		Sama_2139	0.78	-0.2
2,584,689	-		Sama_2139	0.81	-0.6