Strain Fitness in Shewanella amazonensis SB2B around Sama_R0067

Experiment: Motility assay, center cut sample 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 2
2,155,217	+		Sama_1760	0.76	-1.4
2,155,218	-		Sama_1760	0.76	-2.3
2,155,219	+		Sama_1760	0.76	+1.2
2,155,219	+		Sama_1760	0.76	-1.5
2,155,219	+		Sama_1760	0.76	+0.2
2,155,219	+		Sama_1760	0.76	-0.9
2,155,219	+		Sama_1760	0.76	-0.8
2,155,219	+		Sama_1760	0.76	-0.8
2,155,219	+		Sama_1760	0.76	-0.0
2,155,219	+		Sama_1760	0.76	+0.6
2,155,219	+		Sama_1760	0.76	-0.4
2,155,219	+		Sama_1760	0.76	-1.6
2,155,220	-		Sama_1760	0.76	-1.6
2,155,220	-		Sama_1760	0.76	+0.8
2,155,220	-		Sama_1760	0.76	-2.3
2,155,220	-		Sama_1760	0.76	-2.8
2,155,308	-		Sama_1760	0.80	-0.3
2,155,350	+		Sama_1760	0.81	-2.4
2,155,350	+		Sama_1760	0.81	-1.5
2,155,351	-		Sama_1760	0.81	-1.3
2,155,351	-		Sama_1760	0.81	+1.7
2,155,351	-		Sama_1760	0.81	-1.0
2,155,351	-		Sama_1760	0.81	-3.2
2,155,442	+		Sama_1760	0.85	-0.0
2,155,572	-		Sama_1760	0.89	-1.4
2,155,572	-		Sama_1760	0.89	-0.8
2,155,714	+				-3.3
2,155,835	+				-0.7
2,155,900	+				-1.4
2,155,901	-				+1.5
2,155,901	-				-0.3
2,155,956	-				+0.2
2,155,973	+				+1.0
2,155,984	-				+0.7
2,156,107	-		Sama_R0066	0.45	-2.7
2,156,120	-		Sama_R0066	0.62	-1.4
2,156,128	-		Sama_R0066	0.73	+1.2
2,156,149	-				+0.0
2,156,149	-				-0.4
2,156,149	-				-2.4
2,156,149	-				-1.4
2,156,149	-				+2.0
2,156,149	-				+1.9
2,156,149	-				-2.4
2,156,149	-				-1.0
2,156,192	-				+1.4
2,156,223	-		Sama_R0067	0.45	+0.2
2,156,223	-		Sama_R0067	0.45	-2.7
2,156,257	-				-1.2
2,156,292	-				-0.8
2,156,294	-				-1.1
2,156,297	-				-0.0
2,156,297	-				-1.1
2,156,411	+				+3.4
2,156,565	-		Sama_1761	0.11	+0.5
2,156,578	-		Sama_1761	0.12	+1.2
2,156,610	-		Sama_1761	0.15	-1.7
2,156,631	+		Sama_1761	0.16	-2.3
2,156,632	-		Sama_1761	0.16	+1.5
2,156,634	-		Sama_1761	0.16	+1.0
2,156,665	+		Sama_1761	0.19	+3.2
2,156,666	-		Sama_1761	0.19	+0.9
2,156,684	+		Sama_1761	0.20	+1.0
2,156,685	-		Sama_1761	0.20	+0.9
2,156,745	-		Sama_1761	0.25	-0.4
2,156,745	-		Sama_1761	0.25	-0.7
2,156,770	+		Sama_1761	0.26	-1.8
2,156,770	+		Sama_1761	0.26	-0.0
2,156,782	-		Sama_1761	0.27	-0.2
2,156,790	+		Sama_1761	0.28	-0.4
2,156,791	-		Sama_1761	0.28	-0.8
2,156,801	-		Sama_1761	0.29	-0.0
2,156,834	-		Sama_1761	0.31	+1.2
2,156,871	-		Sama_1761	0.34	-0.1
2,156,871	-		Sama_1761	0.34	-1.1
2,156,873	+		Sama_1761	0.34	-2.3
2,156,873	+		Sama_1761	0.34	+1.2
2,156,874	-		Sama_1761	0.34	-2.0
2,156,904	+		Sama_1761	0.36	+0.2
2,156,904	+		Sama_1761	0.36	+1.6
2,156,905	-		Sama_1761	0.36	-1.6
2,156,919	+		Sama_1761	0.37	-1.0
2,156,948	-		Sama_1761	0.40	+1.6
2,156,989	+		Sama_1761	0.43	-0.4
2,156,990	-		Sama_1761	0.43	+1.0
2,157,079	+		Sama_1761	0.49	-0.3
2,157,080	-		Sama_1761	0.49	+1.0
2,157,103	-		Sama_1761	0.51	-1.4
2,157,141	+		Sama_1761	0.54	-1.5
2,157,142	-		Sama_1761	0.54	+1.7
2,157,160	+		Sama_1761	0.55	-0.4
2,157,248	+		Sama_1761	0.62	-0.5
2,157,248	+		Sama_1761	0.62	-1.1
2,157,249	-		Sama_1761	0.62	+1.2
2,157,249	-		Sama_1761	0.62	-2.3