Strain Fitness in Shewanella amazonensis SB2B around Sama_1754

Experiment: Motility assay, center cut sample 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 2
2,144,562	-				+0.7
2,144,630	-				-1.8
2,144,637	-				-0.1
2,144,681	+		Sama_1753	0.11	-2.1
2,144,682	-		Sama_1753	0.11	-0.6
2,144,682	-		Sama_1753	0.11	+0.2
2,144,682	-		Sama_1753	0.11	+1.5
2,144,682	-		Sama_1753	0.11	+0.4
2,144,684	-		Sama_1753	0.12	+3.2
2,144,684	-		Sama_1753	0.12	+1.2
2,144,835	+		Sama_1753	0.34	-1.0
2,144,836	-		Sama_1753	0.34	+0.4
2,144,836	-		Sama_1753	0.34	-0.9
2,144,836	-		Sama_1753	0.34	-2.0
2,144,839	+		Sama_1753	0.34	-0.4
2,144,839	+		Sama_1753	0.34	-0.7
2,144,839	+		Sama_1753	0.34	-0.6
2,144,839	+		Sama_1753	0.34	-1.8
2,144,839	+		Sama_1753	0.34	-0.8
2,144,839	+		Sama_1753	0.34	-0.4
2,144,839	+		Sama_1753	0.34	+1.0
2,144,840	-		Sama_1753	0.35	+0.5
2,144,840	-		Sama_1753	0.35	+0.4
2,144,840	-		Sama_1753	0.35	-1.6
2,144,840	-		Sama_1753	0.35	-0.7
2,144,840	-		Sama_1753	0.35	+0.2
2,144,840	-		Sama_1753	0.35	+0.3
2,144,840	-		Sama_1753	0.35	+0.6
2,144,840	-		Sama_1753	0.35	-0.8
2,144,840	-		Sama_1753	0.35	-0.4
2,144,840	-		Sama_1753	0.35	+2.1
2,144,840	-		Sama_1753	0.35	-0.1
2,144,840	-		Sama_1753	0.35	+1.0
2,144,840	-		Sama_1753	0.35	-0.1
2,144,841	+		Sama_1753	0.35	+0.7
2,144,841	+		Sama_1753	0.35	-1.4
2,144,841	+		Sama_1753	0.35	+1.8
2,144,841	+		Sama_1753	0.35	+0.8
2,144,841	+		Sama_1753	0.35	+1.0
2,144,841	+		Sama_1753	0.35	-0.4
2,144,841	+		Sama_1753	0.35	-0.4
2,144,842	-		Sama_1753	0.35	-0.4
2,144,842	-		Sama_1753	0.35	-0.8
2,144,842	-		Sama_1753	0.35	+0.2
2,144,842	-		Sama_1753	0.35	+1.0
2,144,842	-		Sama_1753	0.35	-2.1
2,144,842	-		Sama_1753	0.35	-1.4
2,144,842	-		Sama_1753	0.35	+2.2
2,144,842	-		Sama_1753	0.35	-0.7
2,144,842	-		Sama_1753	0.35	-0.3
2,144,842	-		Sama_1753	0.35	-0.4
2,144,842	-		Sama_1753	0.35	+1.2
2,144,842	-		Sama_1753	0.35	-1.7
2,144,842	-		Sama_1753	0.35	-0.5
2,144,842	-		Sama_1753	0.35	+0.4
2,144,842	-		Sama_1753	0.35	+0.0
2,144,877	+		Sama_1753	0.40	+1.2
2,144,898	+		Sama_1753	0.43	-0.3
2,144,898	+		Sama_1753	0.43	-0.6
2,144,898	+		Sama_1753	0.43	-1.8
2,144,899	-		Sama_1753	0.43	-0.4
2,144,899	-		Sama_1753	0.43	-1.5
2,144,899	-		Sama_1753	0.43	-1.1
2,145,125	+		Sama_1753	0.77	-0.1
2,145,125	+		Sama_1753	0.77	-2.3
2,145,126	-		Sama_1753	0.77	-1.0
2,145,126	-		Sama_1753	0.77	+0.9
2,145,263	+				-0.6
2,145,263	+				+1.9
2,145,264	-				+0.2
2,145,269	+				+2.6
2,145,284	+				-2.6
2,145,284	+				-0.6
2,145,285	-				+0.5
2,145,285	-				+1.9
2,145,310	+				+0.3
2,145,311	-				-0.8
2,145,311	-				-0.6
2,145,324	+				-0.6
2,145,325	-				-0.8
2,145,325	-				-0.4
2,145,327	-				+1.6
2,145,327	-				-0.8
2,145,332	+				+0.2
2,145,333	-				-0.1
2,145,379	+				+1.3
2,145,412	+				-0.1
2,145,412	+				-0.1
2,145,413	-				-0.6
2,145,438	+				-1.9
2,145,445	-				+1.8
2,145,472	-				+1.2
2,145,549	-				-0.8
2,145,567	-				-2.0
2,145,567	-				+1.2
2,145,590	+				-0.4
2,145,590	+				-1.1
2,145,590	+				-0.4
2,145,591	-				+1.3
2,145,591	-				-1.1
2,145,612	-		Sama_1754	0.13	-0.0
2,145,613	+		Sama_1754	0.13	-0.1
2,145,614	-		Sama_1754	0.13	-1.8
2,145,640	+		Sama_1754	0.18	+2.4
2,145,641	-		Sama_1754	0.18	-2.8
2,145,653	-		Sama_1754	0.20	-1.0
2,145,663	+		Sama_1754	0.22	+0.3
2,145,664	-		Sama_1754	0.22	+1.7
2,145,745	+		Sama_1754	0.37	+1.0
2,145,748	+		Sama_1754	0.37	+0.7
2,145,748	+		Sama_1754	0.37	+0.8
2,145,748	+		Sama_1754	0.37	+1.6
2,145,748	+		Sama_1754	0.37	+0.2
2,145,748	+		Sama_1754	0.37	-0.4
2,145,748	+		Sama_1754	0.37	+2.0
2,145,748	+		Sama_1754	0.37	+1.8
2,145,748	+		Sama_1754	0.37	+0.5
2,145,749	-		Sama_1754	0.37	-3.0
2,145,749	-		Sama_1754	0.37	-2.3
2,145,749	-		Sama_1754	0.37	+1.2
2,145,749	-		Sama_1754	0.37	-2.4
2,145,754	+		Sama_1754	0.38	-1.6
2,145,810	-		Sama_1754	0.48	-0.5
2,145,810	-		Sama_1754	0.48	-1.3
2,145,853	+		Sama_1754	0.56	+1.2
2,145,853	+		Sama_1754	0.56	-0.1
2,145,853	+		Sama_1754	0.56	-0.1
2,145,854	-		Sama_1754	0.56	-1.1
2,145,854	-		Sama_1754	0.56	-2.1
2,145,854	-		Sama_1754	0.56	-2.0
2,145,854	-		Sama_1754	0.56	-1.4
2,145,854	-		Sama_1754	0.56	-0.1
2,145,854	-		Sama_1754	0.56	+0.8
2,145,854	-		Sama_1754	0.56	+1.5
2,145,854	-		Sama_1754	0.56	-2.9
2,145,854	-		Sama_1754	0.56	-0.2
2,145,858	-		Sama_1754	0.57	+1.7
2,145,858	-		Sama_1754	0.57	+1.1
2,145,950	-		Sama_1754	0.73	+1.7
2,145,962	+		Sama_1754	0.76	+1.6
2,145,963	-		Sama_1754	0.76	+0.8
2,146,097	+				-0.2
2,146,098	-				+2.2
2,146,100	+				+1.2
2,146,101	-				+1.8
2,146,101	-				-1.1
2,146,101	-				-2.4
2,146,145	-				+0.1
2,146,153	+				-0.5
2,146,154	-				-1.7
2,146,154	-				+0.5
2,146,154	-				-0.6
2,146,208	-				+1.7
2,146,298	+				-0.6
2,146,335	+				-0.3
2,146,336	-				-1.4
2,146,484	-		Sama_1755	0.15	-0.4
2,146,518	+		Sama_1755	0.18	-0.8
2,146,519	-		Sama_1755	0.18	-1.5
2,146,568	-		Sama_1755	0.22	-1.1
2,146,581	+		Sama_1755	0.23	-1.8
2,146,619	+		Sama_1755	0.27	-0.1
2,146,619	+		Sama_1755	0.27	-0.1
2,146,619	+		Sama_1755	0.27	-0.1
2,146,662	-		Sama_1755	0.31	-1.6
2,146,682	+		Sama_1755	0.33	-0.2
2,146,683	-		Sama_1755	0.33	-1.8
2,146,694	+		Sama_1755	0.34	+2.0
2,146,695	-		Sama_1755	0.34	-1.1
2,146,737	-		Sama_1755	0.38	-2.7
2,146,737	-		Sama_1755	0.38	+0.8
2,146,749	+		Sama_1755	0.39	-1.0
2,146,996	+		Sama_1755	0.61	-0.5
2,147,006	+		Sama_1755	0.62	-0.1
2,147,058	+		Sama_1755	0.67	-1.4
2,147,091	-		Sama_1755	0.70	-0.4