Strain Fitness in Shewanella amazonensis SB2B around Sama_1743

Experiment: Motility assay, center cut sample 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 2
2,131,301	+		Sama_1741	0.86	-0.5
2,131,387	-				-3.0
2,131,594	+		Sama_1742	0.19	+1.4
2,131,616	+		Sama_1742	0.23	-0.4
2,131,617	-		Sama_1742	0.23	+0.2
2,131,661	+		Sama_1742	0.31	-1.8
2,131,661	+		Sama_1742	0.31	-2.0
2,131,661	+		Sama_1742	0.31	-0.5
2,131,670	+		Sama_1742	0.33	+0.4
2,131,748	+		Sama_1742	0.47	+0.6
2,131,749	-		Sama_1742	0.47	+0.3
2,131,782	+		Sama_1742	0.53	-0.8
2,131,782	+		Sama_1742	0.53	+5.4
2,131,789	+		Sama_1742	0.55	-0.4
2,131,790	-		Sama_1742	0.55	-0.4
2,131,790	-		Sama_1742	0.55	+0.2
2,131,812	+		Sama_1742	0.59	+2.5
2,131,813	-		Sama_1742	0.59	-1.1
2,132,007	+				+0.2
2,132,007	+				+2.8
2,132,007	+				-0.0
2,132,034	+				-0.4
2,132,035	-				+1.7
2,132,081	+				-2.0
2,132,087	+				-0.8
2,132,179	+				+0.6
2,132,222	+				-0.7
2,132,222	+				-0.1
2,132,223	-				-0.6
2,132,223	-				-0.7
2,132,223	-				+0.9
2,132,226	+				+1.1
2,132,226	+				-2.0
2,132,226	+				+0.4
2,132,226	+				-1.4
2,132,227	-				+0.4
2,132,227	-				-0.3
2,132,227	-				+2.1
2,132,277	+				+1.2
2,132,301	-				-1.0
2,132,340	+				+3.3
2,132,347	-		Sama_1743	0.10	-0.4
2,132,407	+		Sama_1743	0.14	-1.8
2,132,419	+		Sama_1743	0.14	-2.8
2,132,524	+		Sama_1743	0.20	-1.3
2,132,525	-		Sama_1743	0.20	-0.9
2,132,544	+		Sama_1743	0.22	-2.4
2,132,544	+		Sama_1743	0.22	-1.4
2,132,586	+		Sama_1743	0.24	-0.7
2,132,610	+		Sama_1743	0.25	+0.2
2,132,610	+		Sama_1743	0.25	-0.6
2,132,610	+		Sama_1743	0.25	-0.6
2,132,610	+		Sama_1743	0.25	+1.6
2,132,611	-		Sama_1743	0.25	-2.2
2,132,620	+		Sama_1743	0.26	+1.2
2,132,635	+		Sama_1743	0.27	-1.6
2,132,636	-		Sama_1743	0.27	-0.4
2,132,636	-		Sama_1743	0.27	+0.2
2,132,636	-		Sama_1743	0.27	+0.2
2,132,664	+		Sama_1743	0.28	+0.3
2,132,665	-		Sama_1743	0.28	-0.3
2,132,738	-		Sama_1743	0.33	-1.0
2,132,738	-		Sama_1743	0.33	-0.4
2,132,738	-		Sama_1743	0.33	-0.3
2,132,921	+		Sama_1743	0.43	-0.6
2,132,921	+		Sama_1743	0.43	+0.4
2,132,962	-		Sama_1743	0.46	-0.4
2,133,021	+		Sama_1743	0.49	-0.8
2,133,040	+		Sama_1743	0.50	-1.1
2,133,040	+		Sama_1743	0.50	-2.0
2,133,040	+		Sama_1743	0.50	+2.2
2,133,041	-		Sama_1743	0.50	-0.4
2,133,041	-		Sama_1743	0.50	-0.7
2,133,041	-		Sama_1743	0.50	-0.8
2,133,192	+		Sama_1743	0.59	+1.2
2,133,193	-		Sama_1743	0.59	-0.8
2,133,217	-		Sama_1743	0.60	+0.2
2,133,217	-		Sama_1743	0.60	+0.2
2,133,313	+		Sama_1743	0.66	-0.7
2,133,369	+		Sama_1743	0.69	+1.5
2,133,392	+		Sama_1743	0.70	-0.3
2,133,409	+		Sama_1743	0.71	+2.4
2,133,409	+		Sama_1743	0.71	-1.8
2,133,410	-		Sama_1743	0.71	-1.6
2,133,410	-		Sama_1743	0.71	+0.8
2,133,412	-		Sama_1743	0.72	+0.2
2,133,412	-		Sama_1743	0.72	-2.5
2,133,453	+		Sama_1743	0.74	-0.3
2,133,579	+		Sama_1743	0.81	-0.1
2,133,632	+		Sama_1743	0.84	+0.3
2,133,632	+		Sama_1743	0.84	-1.7
2,133,651	+		Sama_1743	0.85	+0.2
2,133,652	-		Sama_1743	0.85	-0.3
2,133,654	+		Sama_1743	0.85	+0.6
2,133,654	+		Sama_1743	0.85	-0.6
2,133,654	+		Sama_1743	0.85	+0.2
2,133,654	+		Sama_1743	0.85	-1.2
2,133,654	+		Sama_1743	0.85	+0.2
2,133,654	+		Sama_1743	0.85	+0.9
2,133,724	+		Sama_1743	0.89	+2.1
2,133,725	-		Sama_1743	0.90	-0.1
2,133,730	+		Sama_1743	0.90	+1.2
2,133,733	+				+0.0
2,133,799	+				-0.4
2,133,808	+				+0.2
2,133,811	+				+3.1
2,133,939	-				+1.8
2,133,940	+				+0.7
2,134,043	-				-0.1
2,134,043	-				+0.4
2,134,102	+				-0.1
2,134,102	+				+1.4
2,134,103	-				-2.3
2,134,103	-				-1.3
2,134,103	-				-1.4
2,134,107	-				+0.8
2,134,129	+				-2.5
2,134,130	-				-2.6
2,134,157	+				+0.2
2,134,176	-				-3.5
2,134,176	-				+0.2
2,134,189	-				-1.4
2,134,299	+		Sama_1744	0.15	+0.0
2,134,300	-		Sama_1744	0.15	+0.6
2,134,300	-		Sama_1744	0.15	-1.1
2,134,353	+		Sama_1744	0.18	+3.6
2,134,354	-		Sama_1744	0.18	-1.1
2,134,354	-		Sama_1744	0.18	-1.3
2,134,354	-		Sama_1744	0.18	+0.8
2,134,405	+		Sama_1744	0.21	+0.5
2,134,417	-		Sama_1744	0.22	-1.5
2,134,424	+		Sama_1744	0.22	-0.8
2,134,424	+		Sama_1744	0.22	+0.7
2,134,424	+		Sama_1744	0.22	-1.8
2,134,424	+		Sama_1744	0.22	+0.5
2,134,424	+		Sama_1744	0.22	+1.9
2,134,509	+		Sama_1744	0.27	+2.1
2,134,509	+		Sama_1744	0.27	-0.5
2,134,663	+		Sama_1744	0.37	+0.4
2,134,663	+		Sama_1744	0.37	+0.9
2,134,663	+		Sama_1744	0.37	-1.6
2,134,664	-		Sama_1744	0.37	-0.4
2,134,664	-		Sama_1744	0.37	-2.1
2,134,664	-		Sama_1744	0.37	-0.3
2,134,668	-		Sama_1744	0.37	+0.5
2,134,730	+		Sama_1744	0.41	-1.1