Strain Fitness in Shewanella amazonensis SB2B around Sama_1640

Experiment: Motility assay, center cut sample 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 2
2,004,891	+		Sama_1638	0.22	+0.2
2,004,891	+		Sama_1638	0.22	+0.6
2,004,892	-		Sama_1638	0.23	+0.6
2,004,892	-		Sama_1638	0.23	-1.5
2,004,905	+		Sama_1638	0.28	+1.5
2,004,957	-		Sama_1638	0.47	+0.6
2,004,957	-		Sama_1638	0.47	+0.5
2,005,015	-		Sama_1638	0.69	+0.2
2,005,053	+		Sama_1638	0.83	-1.5
2,005,053	+		Sama_1638	0.83	+0.0
2,005,053	+		Sama_1638	0.83	-0.8
2,005,053	+		Sama_1638	0.83	-1.4
2,005,053	+		Sama_1638	0.83	-0.8
2,005,054	-		Sama_1638	0.84	-2.3
2,005,054	-		Sama_1638	0.84	-0.8
2,005,054	-		Sama_1638	0.84	-0.8
2,005,054	-		Sama_1638	0.84	-1.0
2,005,054	-		Sama_1638	0.84	-0.9
2,005,054	-		Sama_1638	0.84	-1.1
2,005,104	-				+0.6
2,006,102	-		Sama_1640	0.20	-1.4
2,006,234	-		Sama_1640	0.32	-1.0
2,007,013	-				-0.0
2,007,013	-				-1.0
2,007,013	-				-0.4
2,007,064	-				+0.2
2,007,216	-		Sama_1641	0.20	-1.6
2,007,289	-		Sama_1641	0.26	-1.5