Strain Fitness in Shewanella amazonensis SB2B around Sama_1409

Experiment: Motility assay, center cut sample 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 2
1,711,607	+				+2.5
1,711,607	+				+6.2
1,711,681	+				-1.8
1,711,803	+				-1.3
1,711,803	+				-1.0
1,711,993	+				+6.9
1,712,055	+		Sama_1409	0.12	+7.5
1,712,263	+		Sama_1409	0.25	+6.7
1,712,263	+		Sama_1409	0.25	+3.3
1,712,340	+		Sama_1409	0.29	-0.9
1,712,340	+		Sama_1409	0.29	-0.4
1,712,410	+		Sama_1409	0.34	+7.4
1,712,410	+		Sama_1409	0.34	+5.9
1,712,775	+		Sama_1409	0.56	+5.0
1,712,775	+		Sama_1409	0.56	+0.2
1,712,830	+		Sama_1409	0.59	+6.5
1,712,842	+		Sama_1409	0.60	+4.2
1,712,947	+		Sama_1409	0.66	+9.3
1,712,947	+		Sama_1409	0.66	+5.7
1,713,054	+		Sama_1409	0.73	+3.1
1,713,348	+				-1.2
1,713,352	+				-1.2
1,713,403	+				-1.2
1,713,464	+				-0.2
1,713,464	+				-1.9
1,713,464	+				+0.1
1,713,464	+				-0.9
1,713,468	+				+0.6
1,713,468	+				-2.8
1,713,508	+				-0.6
1,713,542	+				-0.8