Strain Fitness in Shewanella amazonensis SB2B around Sama_1352

Experiment: Motility assay, center cut sample 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 2
1,640,528	+		Sama_1351	0.26	-0.4
1,640,609	-		Sama_1351	0.33	-0.6
1,640,714	-		Sama_1351	0.42	+0.6
1,640,933	-		Sama_1351	0.61	+1.0
1,640,945	+		Sama_1351	0.62	-0.6
1,640,946	-		Sama_1351	0.62	-1.7
1,640,946	-		Sama_1351	0.62	+2.3
1,640,946	-		Sama_1351	0.62	+0.6
1,641,038	-		Sama_1351	0.70	-1.0
1,641,150	-		Sama_1351	0.80	-0.4
1,641,199	-		Sama_1351	0.84	+0.5
1,641,359	+				-1.4
1,641,434	-				-0.8
1,641,479	-				-0.8
1,641,479	-				-0.4
1,641,534	-				+0.6
1,641,591	+		Sama_1352	0.30	+1.4
1,641,592	-		Sama_1352	0.30	-1.3
1,641,592	-		Sama_1352	0.30	-2.2
1,641,594	-		Sama_1352	0.31	+0.0
1,641,733	+		Sama_1352	0.85	-1.7
1,641,754	+				-0.1
1,641,842	+				-2.5
1,641,918	+				+0.7
1,641,919	-				-2.5
1,641,923	-				-1.1
1,641,923	-				+3.0
1,641,955	+		Sama_1353	0.11	-0.2
1,641,979	+		Sama_1353	0.13	-0.6
1,642,043	-		Sama_1353	0.20	-0.8
1,642,049	-		Sama_1353	0.20	-1.2
1,642,051	+		Sama_1353	0.21	+3.2
1,642,117	+		Sama_1353	0.27	+0.9
1,642,117	+		Sama_1353	0.27	-0.8
1,642,118	-		Sama_1353	0.27	+4.7
1,642,118	-		Sama_1353	0.27	+0.6
1,642,118	-		Sama_1353	0.27	+0.4
1,642,119	+		Sama_1353	0.27	-1.8
1,642,120	-		Sama_1353	0.27	-1.1
1,642,172	-		Sama_1353	0.32	-1.4
1,642,172	-		Sama_1353	0.32	+1.3
1,642,223	-		Sama_1353	0.37	+0.1
1,642,246	+		Sama_1353	0.40	+0.7
1,642,246	+		Sama_1353	0.40	+0.6
1,642,331	-		Sama_1353	0.48	-2.0
1,642,421	-		Sama_1353	0.57	-1.0
1,642,421	-		Sama_1353	0.57	-0.9
1,642,605	+		Sama_1353	0.75	-0.9
1,642,628	-		Sama_1353	0.77	-0.5
1,642,759	+		Sama_1353	0.90	-2.1