Strain Fitness in Shewanella amazonensis SB2B around Sama_1300

Experiment: Motility assay, center cut sample 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 2
1,584,912	+		Sama_1299	0.10	+1.4
1,584,928	+		Sama_1299	0.12	+0.9
1,584,928	+		Sama_1299	0.12	-0.1
1,584,929	-		Sama_1299	0.12	+2.3
1,584,930	+		Sama_1299	0.12	-0.8
1,584,930	+		Sama_1299	0.12	-2.3
1,584,930	+		Sama_1299	0.12	+1.4
1,584,930	+		Sama_1299	0.12	-2.5
1,584,930	+		Sama_1299	0.12	+1.4
1,584,931	-		Sama_1299	0.13	-0.4
1,584,931	-		Sama_1299	0.13	-0.6
1,584,931	-		Sama_1299	0.13	-1.6
1,584,931	-		Sama_1299	0.13	+0.4
1,584,931	-		Sama_1299	0.13	-1.9
1,584,942	+		Sama_1299	0.14	+1.1
1,584,942	+		Sama_1299	0.14	+3.1
1,584,943	-		Sama_1299	0.14	+0.9
1,584,943	-		Sama_1299	0.14	+1.6
1,584,943	-		Sama_1299	0.14	-2.8
1,584,984	+		Sama_1299	0.18	+1.3
1,585,030	+		Sama_1299	0.24	-1.1
1,585,030	+		Sama_1299	0.24	-0.7
1,585,030	+		Sama_1299	0.24	+1.4
1,585,072	+		Sama_1299	0.28	+1.4
1,585,072	+		Sama_1299	0.28	-1.6
1,585,072	+		Sama_1299	0.28	+2.0
1,585,072	+		Sama_1299	0.28	+0.9
1,585,072	+		Sama_1299	0.28	-0.1
1,585,072	+		Sama_1299	0.28	+0.8
1,585,073	-		Sama_1299	0.28	+0.9
1,585,073	-		Sama_1299	0.28	-0.6
1,585,073	-		Sama_1299	0.28	+1.0
1,585,073	-		Sama_1299	0.28	-1.1
1,585,073	-		Sama_1299	0.28	+2.3
1,585,073	-		Sama_1299	0.28	-0.9
1,585,073	-		Sama_1299	0.28	-0.1
1,585,073	-		Sama_1299	0.28	+1.0
1,585,074	+		Sama_1299	0.28	-2.0
1,585,075	-		Sama_1299	0.28	-1.4
1,585,079	+		Sama_1299	0.29	+1.3
1,585,079	+		Sama_1299	0.29	-1.6
1,585,080	-		Sama_1299	0.29	+1.7
1,585,118	+		Sama_1299	0.33	+0.9
1,585,118	+		Sama_1299	0.33	+0.1
1,585,118	+		Sama_1299	0.33	+2.2
1,585,118	+		Sama_1299	0.33	-0.1
1,585,118	+		Sama_1299	0.33	+1.3
1,585,118	+		Sama_1299	0.33	+0.1
1,585,118	+		Sama_1299	0.33	+0.4
1,585,118	+		Sama_1299	0.33	+0.8
1,585,118	+		Sama_1299	0.33	-0.1
1,585,118	+		Sama_1299	0.33	+1.9
1,585,118	+		Sama_1299	0.33	-1.9
1,585,119	-		Sama_1299	0.33	-0.6
1,585,119	-		Sama_1299	0.33	+2.9
1,585,151	+		Sama_1299	0.37	+0.8
1,585,151	+		Sama_1299	0.37	-0.9
1,585,151	+		Sama_1299	0.37	+0.6
1,585,152	-		Sama_1299	0.37	+1.6
1,585,152	-		Sama_1299	0.37	-0.6
1,585,152	-		Sama_1299	0.37	+1.7
1,585,152	-		Sama_1299	0.37	-2.1
1,585,236	+		Sama_1299	0.46	+1.2
1,585,236	+		Sama_1299	0.46	+0.3
1,585,237	-		Sama_1299	0.46	+1.0
1,585,237	-		Sama_1299	0.46	-2.0
1,585,237	-		Sama_1299	0.46	-1.6
1,585,237	-		Sama_1299	0.46	+0.2
1,585,237	-		Sama_1299	0.46	-1.1
1,585,237	-		Sama_1299	0.46	+1.4
1,585,262	+		Sama_1299	0.49	+0.4
1,585,262	+		Sama_1299	0.49	+0.4
1,585,262	+		Sama_1299	0.49	+0.8
1,585,262	+		Sama_1299	0.49	+0.7
1,585,262	+		Sama_1299	0.49	+1.4
1,585,263	-		Sama_1299	0.49	+3.1
1,585,263	-		Sama_1299	0.49	+0.9
1,585,263	-		Sama_1299	0.49	+1.3
1,585,263	-		Sama_1299	0.49	-1.6
1,585,318	-		Sama_1299	0.55	-1.6
1,585,351	+		Sama_1299	0.59	-0.0
1,585,351	+		Sama_1299	0.59	+0.6
1,585,351	+		Sama_1299	0.59	-1.6
1,585,351	+		Sama_1299	0.59	+4.1
1,585,352	-		Sama_1299	0.59	+1.2
1,585,352	-		Sama_1299	0.59	+1.4
1,585,352	-		Sama_1299	0.59	+0.2
1,585,352	-		Sama_1299	0.59	-1.4
1,585,353	+		Sama_1299	0.59	+0.6
1,585,485	+		Sama_1299	0.74	+0.7
1,585,485	+		Sama_1299	0.74	+1.4
1,585,625	+		Sama_1299	0.89	+2.1
1,585,625	+		Sama_1299	0.89	+1.3
1,585,625	+		Sama_1299	0.89	-1.6
1,585,625	+		Sama_1299	0.89	+1.4
1,585,626	-		Sama_1299	0.89	-0.4
1,585,626	-		Sama_1299	0.89	-0.6
1,585,774	+				-3.4
1,585,817	+				-0.4
1,585,856	+				+1.4
1,585,856	+				-0.6
1,585,887	+				+0.4
1,585,963	+		Sama_1300	0.53	+2.4
1,585,963	+		Sama_1300	0.53	-0.6
1,585,963	+		Sama_1300	0.53	+0.4
1,585,964	-		Sama_1300	0.54	+2.0
1,586,050	+				+1.2
1,586,107	+				-0.8
1,586,108	-				+1.8
1,586,108	-				+2.0
1,586,114	+				-0.1
1,586,120	+				-0.3
1,586,120	+				-1.6
1,586,120	+				+0.2
1,586,135	-				+0.4
1,586,620	+				+0.4
1,586,693	-				+0.7
1,586,693	-				-2.7
1,586,849	-		Sama_1302	0.24	+0.4
1,586,857	-		Sama_1302	0.26	+0.6
1,586,857	-		Sama_1302	0.26	+0.4
1,586,857	-		Sama_1302	0.26	-0.6
1,586,867	-		Sama_1302	0.29	+0.9
1,586,867	-		Sama_1302	0.29	+1.1
1,586,906	-		Sama_1302	0.40	+1.3
1,586,952	-		Sama_1302	0.53	+1.3
1,586,952	-		Sama_1302	0.53	-3.4
1,586,952	-		Sama_1302	0.53	-1.4
1,586,952	-		Sama_1302	0.53	-1.5
1,586,952	-		Sama_1302	0.53	+3.0
1,587,031	+		Sama_1302	0.75	-1.4