Strain Fitness in Shewanella amazonensis SB2B around Sama_1034

Experiment: Motility assay, center cut sample 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 2
1,251,359	+		Sama_1033	0.61	-2.1
1,251,360	-		Sama_1033	0.61	-0.8
1,251,360	-		Sama_1033	0.61	-1.2
1,251,360	-		Sama_1033	0.61	-1.0
1,251,391	+		Sama_1033	0.63	-0.2
1,251,392	-		Sama_1033	0.63	-1.8
1,251,392	-		Sama_1033	0.63	-2.5
1,251,447	-		Sama_1033	0.65	-1.8
1,251,570	+		Sama_1033	0.71	+1.8
1,251,591	+		Sama_1033	0.72	+2.1
1,251,591	+		Sama_1033	0.72	-0.8
1,251,591	+		Sama_1033	0.72	-2.1
1,251,601	+		Sama_1033	0.72	+0.4
1,251,613	+		Sama_1033	0.73	+0.1
1,251,614	-		Sama_1033	0.73	+0.4
1,251,614	-		Sama_1033	0.73	-0.0
1,251,677	-		Sama_1033	0.76	-0.4
1,251,677	-		Sama_1033	0.76	-0.8
1,251,786	+		Sama_1033	0.80	-0.9
1,251,807	+		Sama_1033	0.81	-0.0
1,251,807	+		Sama_1033	0.81	+0.6
1,251,807	+		Sama_1033	0.81	-1.6
1,251,807	+		Sama_1033	0.81	+0.6
1,251,814	+		Sama_1033	0.82	-1.9
1,251,862	+		Sama_1033	0.84	-0.1
1,251,863	-		Sama_1033	0.84	+0.1
1,251,865	+		Sama_1033	0.84	-0.0
1,251,880	+		Sama_1033	0.85	-2.5
1,251,954	+		Sama_1033	0.88	-2.2
1,251,954	+		Sama_1033	0.88	+0.3
1,251,954	+		Sama_1033	0.88	-1.5
1,251,955	-		Sama_1033	0.88	+0.6
1,251,955	-		Sama_1033	0.88	+1.3
1,251,955	-		Sama_1033	0.88	+1.6
1,251,955	-		Sama_1033	0.88	-1.2
1,252,139	+				+1.9
1,252,139	+				+2.6
1,252,139	+				-1.5
1,252,146	+				-0.4
1,252,146	+				-0.8
1,252,146	+				-0.2
1,252,146	+				-2.2
1,252,146	+				-1.6
1,252,146	+				-1.4
1,252,146	+				-1.5
1,252,147	-				+2.0
1,252,147	-				+0.7
1,252,147	-				-1.8
1,252,235	+				+1.8
1,252,251	+				-1.5
1,252,251	+				-0.1
1,252,252	-				+2.8
1,252,288	+				+1.2
1,252,288	+				+1.4
1,252,457	+	mazG	Sama_1034	0.15	+1.4
1,252,457	+	mazG	Sama_1034	0.15	+1.6
1,252,458	-	mazG	Sama_1034	0.15	+2.5
1,252,458	-	mazG	Sama_1034	0.15	-0.2
1,252,483	+	mazG	Sama_1034	0.18	+1.0
1,252,483	+	mazG	Sama_1034	0.18	-1.6
1,252,484	-	mazG	Sama_1034	0.19	+1.1
1,252,484	-	mazG	Sama_1034	0.19	-0.4
1,252,484	-	mazG	Sama_1034	0.19	+0.8
1,252,484	-	mazG	Sama_1034	0.19	+2.1
1,252,567	+	mazG	Sama_1034	0.29	+1.3
1,252,567	+	mazG	Sama_1034	0.29	+0.2
1,252,568	-	mazG	Sama_1034	0.29	-0.5
1,252,669	-	mazG	Sama_1034	0.41	+1.8
1,252,731	+	mazG	Sama_1034	0.48	-0.8
1,252,731	+	mazG	Sama_1034	0.48	+0.6
1,252,732	-	mazG	Sama_1034	0.49	-0.8
1,252,732	-	mazG	Sama_1034	0.49	+1.0
1,252,788	-	mazG	Sama_1034	0.55	+0.3
1,252,971	+	mazG	Sama_1034	0.77	+0.7
1,253,129	+				-0.0
1,253,130	-				+2.3