Strain Fitness in Shewanella oneidensis MR-1 around SO4723

Experiment: Benzalkonium Chloride 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.004 mg/ml
4,926,100	-		SO4721	0.53	+1.5
4,926,198	+		SO4721	0.67	+0.5
4,926,206	-		SO4721	0.68	-0.4
4,926,279	+		SO4721	0.79	+1.2
4,926,292	+		SO4721	0.80	+0.6
4,926,302	+		SO4721	0.82	+1.1
4,926,302	+		SO4721	0.82	+0.8
4,926,310	-		SO4721	0.83	+1.0
4,926,361	+				-0.0
4,926,361	+				-0.5
4,926,361	+				-1.4
4,926,369	-				+0.9
4,926,369	-				+1.7
4,926,384	+				+0.3
4,926,392	-				+1.1
4,926,407	+				+1.6
4,926,500	-	mobA	SO4722	0.14	+1.1
4,926,506	+	mobA	SO4722	0.15	+0.9
4,926,506	+	mobA	SO4722	0.15	+1.5
4,926,514	-	mobA	SO4722	0.17	+1.6
4,926,514	-	mobA	SO4722	0.17	+2.1
4,926,545	+	mobA	SO4722	0.22	-0.9
4,926,552	-	mobA	SO4722	0.23	+1.7
4,926,553	-	mobA	SO4722	0.23	+1.8
4,926,553	-	mobA	SO4722	0.23	+1.6
4,926,563	-	mobA	SO4722	0.25	+1.8
4,926,671	-	mobA	SO4722	0.43	+1.8
4,926,736	-	mobA	SO4722	0.54	+0.9
4,926,829	+	mobA	SO4722	0.70	+1.5
4,926,837	-	mobA	SO4722	0.71	+0.6
4,926,837	-	mobA	SO4722	0.71	+1.5
4,926,837	-	mobA	SO4722	0.71	+1.4
4,926,856	-	mobA	SO4722	0.74	+1.7
4,926,908	-	mobA	SO4722	0.83	+1.0
4,926,928	-	mobA	SO4722	0.87	+1.2
4,926,935	+	mobA	SO4722	0.88	+1.3
4,927,055	-				+1.4
4,927,055	-				+2.3
4,927,064	+				+1.5
4,927,146	-				+1.7
4,927,169	+				+1.0
4,927,177	-				+1.0
4,927,219	+		SO4723	0.10	+2.1
4,927,219	+		SO4723	0.10	+2.1
4,927,409	+		SO4723	0.21	+1.6
4,927,488	+		SO4723	0.25	+1.9
4,927,576	+		SO4723	0.30	+1.2
4,927,581	+		SO4723	0.30	+1.2
4,927,581	+		SO4723	0.30	+1.5
4,927,584	-		SO4723	0.30	+1.9
4,927,605	+		SO4723	0.32	+1.8
4,927,625	-		SO4723	0.33	+1.4
4,927,655	-		SO4723	0.34	+2.2
4,927,695	-		SO4723	0.36	+1.6
4,927,987	+		SO4723	0.53	+2.5
4,927,995	-		SO4723	0.53	+1.7
4,928,019	-		SO4723	0.55	+1.9
4,928,031	+		SO4723	0.55	+2.5
4,928,063	+		SO4723	0.57	+1.5
4,928,084	-		SO4723	0.58	+2.2
4,928,084	-		SO4723	0.58	+1.7
4,928,110	+		SO4723	0.60	+2.2
4,928,124	-		SO4723	0.60	+1.9
4,928,133	-		SO4723	0.61	+2.6
4,928,143	+		SO4723	0.61	+1.9
4,928,167	-		SO4723	0.63	+1.6
4,928,228	+		SO4723	0.66	+1.6
4,928,228	+		SO4723	0.66	+1.8
4,928,236	+		SO4723	0.67	+1.9
4,928,236	-		SO4723	0.67	+1.6
4,928,236	-		SO4723	0.67	+1.2
4,928,236	-		SO4723	0.67	+0.7
4,928,244	-		SO4723	0.67	+1.4
4,928,263	+		SO4723	0.68	+1.9
4,928,264	-		SO4723	0.68	+1.7
4,928,310	+		SO4723	0.71	+1.8
4,928,393	+		SO4723	0.75	+1.8
4,928,485	-		SO4723	0.80	+2.2
4,928,662	+				+1.2
4,928,741	+				+1.8
4,928,846	-				-0.3
4,928,919	-				-2.8
4,929,016	+		SO4724	0.16	+0.4
4,929,051	+		SO4724	0.20	-1.1
4,929,069	+		SO4724	0.22	-0.9
4,929,129	-		SO4724	0.28	-0.2
4,929,149	+		SO4724	0.30	+0.3
4,929,149	+		SO4724	0.30	-0.8
4,929,222	+		SO4724	0.37	-1.0
4,929,230	-		SO4724	0.38	-0.5
4,929,235	-		SO4724	0.39	-1.5
4,929,289	+		SO4724	0.44	+0.4
4,929,389	-		SO4724	0.54	-1.5
4,929,447	+		SO4724	0.60	+0.3
4,929,470	-		SO4724	0.63	-1.2
4,929,501	+		SO4724	0.66	+0.2
4,929,557	-		SO4724	0.71	+0.2
4,929,557	-		SO4724	0.71	-0.1
4,929,559	-		SO4724	0.72	+0.3
4,929,592	-		SO4724	0.75	+1.0
4,929,595	+		SO4724	0.75	-0.5
4,929,621	+		SO4724	0.78	+0.9
4,929,621	+		SO4724	0.78	+2.7
4,929,629	-		SO4724	0.79	-0.1
4,929,629	-		SO4724	0.79	+0.1
4,929,665	+		SO4724	0.82	+0.4
4,929,763	-				+0.7
4,929,767	+				+0.1