Strain Fitness in Shewanella oneidensis MR-1 around SO4449

Experiment: Benzalkonium Chloride 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.004 mg/ml
4,637,825	-		SO4447	0.79	-0.8
4,637,827	+		SO4447	0.79	-2.2
4,637,845	+		SO4447	0.82	-0.1
4,637,845	+		SO4447	0.82	-0.7
4,637,845	+		SO4447	0.82	+0.3
4,637,853	-		SO4447	0.83	-0.5
4,637,853	-		SO4447	0.83	-1.6
4,637,853	-		SO4447	0.83	-0.3
4,637,853	-		SO4447	0.83	-0.3
4,637,883	-		SO4447	0.87	+0.7
4,637,942	-				-2.2
4,637,969	+				-0.0
4,637,969	+				+3.6
4,638,080	+		SO4448	0.13	+0.5
4,638,081	-		SO4448	0.13	-1.5
4,638,115	+		SO4448	0.17	+0.9
4,638,118	-		SO4448	0.18	-1.5
4,638,147	+		SO4448	0.21	-0.5
4,638,181	+		SO4448	0.26	+0.6
4,638,204	-		SO4448	0.29	+0.2
4,638,338	-		SO4448	0.45	+1.5
4,638,392	-		SO4448	0.52	+0.7
4,638,428	+		SO4448	0.57	-0.6
4,638,483	+		SO4448	0.64	-1.5
4,638,538	-		SO4448	0.71	+0.4
4,638,589	+		SO4448	0.77	-0.4
4,638,595	+		SO4448	0.78	+0.9
4,638,603	-		SO4448	0.79	-0.0
4,638,630	+		SO4448	0.82	-1.5
4,638,734	+				+1.1
4,638,742	-				+0.6
4,638,742	-				-0.2
4,638,754	+				-1.1
4,638,804	+				-1.0
4,638,852	-	moaE	SO4449	0.11	+1.2
4,638,862	+	moaE	SO4449	0.13	+1.6
4,638,949	+	moaE	SO4449	0.32	+2.5
4,638,967	-	moaE	SO4449	0.35	+1.2
4,639,006	-	moaE	SO4449	0.44	+1.3
4,639,009	+	moaE	SO4449	0.44	+1.7
4,639,017	+	moaE	SO4449	0.46	+1.3
4,639,017	+	moaE	SO4449	0.46	+1.3
4,639,025	-	moaE	SO4449	0.48	+1.1
4,639,042	+	moaE	SO4449	0.51	+1.5
4,639,106	+	moaE	SO4449	0.65	+1.2
4,639,186	+	moaE	SO4449	0.82	+1.7
4,639,335	+	moaD	SO4450	0.26	+1.6
4,639,335	+	moaD	SO4450	0.26	+1.2
4,639,375	+	moaD	SO4450	0.42	+1.6
4,639,383	-	moaD	SO4450	0.45	+2.2
4,639,383	-	moaD	SO4450	0.45	+2.0
4,639,383	-	moaD	SO4450	0.45	+2.2
4,639,455	+	moaD	SO4450	0.73	+2.8
4,639,455	+	moaD	SO4450	0.73	+1.6
4,639,455	+	moaD	SO4450	0.73	+1.6
4,639,455	+	moaD	SO4450	0.73	+1.8
4,639,463	-	moaD	SO4450	0.77	+1.2
4,639,473	-	moaD	SO4450	0.81	+1.4
4,639,473	-	moaD	SO4450	0.81	+1.8
4,639,548	+				+0.8
4,639,548	+				+2.0
4,639,548	+				+1.3
4,639,548	+				+0.8
4,639,548	+				+1.5
4,639,548	+				+1.2
4,639,556	-				+0.5
4,639,556	-				-0.9
4,639,596	-	moaC	SO4451	0.11	+1.3
4,639,623	+	moaC	SO4451	0.17	+0.8
4,639,623	+	moaC	SO4451	0.17	+0.8
4,639,631	-	moaC	SO4451	0.19	+1.6
4,639,631	-	moaC	SO4451	0.19	+1.1
4,639,631	-	moaC	SO4451	0.19	+2.5
4,639,714	+	moaC	SO4451	0.36	+0.8
4,639,714	+	moaC	SO4451	0.36	+2.0
4,639,714	+	moaC	SO4451	0.36	+1.0
4,639,714	+	moaC	SO4451	0.36	+1.9
4,639,722	-	moaC	SO4451	0.38	+1.2
4,639,722	-	moaC	SO4451	0.38	+1.4
4,639,722	-	moaC	SO4451	0.38	+2.6
4,639,856	+	moaC	SO4451	0.66	+1.4
4,639,871	-	moaC	SO4451	0.69	+2.4
4,639,871	-	moaC	SO4451	0.69	+0.8
4,639,881	+	moaC	SO4451	0.71	+0.3
4,639,986	-				+1.3
4,640,011	-				+1.5
4,640,030	+				+1.2
4,640,038	-				-0.2
4,640,038	-				+0.1
4,640,056	-				-0.0
4,640,176	+				+0.4
4,640,260	-	moaA	SO4452	0.13	+1.8