Strain Fitness in Shewanella oneidensis MR-1 around SO4326

Experiment: Benzalkonium Chloride 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.004 mg/ml
4,517,535	-				-0.3
4,517,536	-				+0.6
4,517,536	-				-0.4
4,517,597	-				-0.3
4,517,599	-				+0.4
4,517,614	+				+1.6
4,517,657	+				+0.7
4,517,665	-				+0.0
4,517,983	+		SO4326	0.32	-1.5
4,517,983	+		SO4326	0.32	-2.8
4,517,991	-		SO4326	0.33	-4.6
4,517,993	+		SO4326	0.33	-0.8
4,517,993	+		SO4326	0.33	+0.6
4,517,993	+		SO4326	0.33	-1.1
4,517,993	+		SO4326	0.33	-1.2
4,518,101	-		SO4326	0.51	-3.2
4,518,132	+		SO4326	0.56	+2.2
4,518,139	+		SO4326	0.57	-1.9
4,518,139	+		SO4326	0.57	-3.3
4,518,147	-		SO4326	0.59	-3.8
4,518,165	+		SO4326	0.62	+2.1
4,518,231	+		SO4326	0.72	+0.5
4,518,245	-		SO4326	0.75	-1.7
4,518,288	-		SO4326	0.82	-4.6
4,518,309	+		SO4326	0.85	-0.8
4,518,315	+		SO4326	0.86	+3.1
4,518,334	+		SO4326	0.89	-3.2
4,518,342	-				-2.9
4,518,342	-				-3.8
4,518,342	-				-1.4
4,518,342	-				-4.8
4,518,391	+				-1.8
4,518,468	-				-4.9
4,518,485	+				-5.1
4,518,485	+				-3.4
4,518,485	+				-3.6
4,518,493	-				-3.7
4,518,493	-				-3.8
4,518,493	-				+0.2
4,518,493	-				-3.8
4,518,493	-				-4.8
4,518,493	-				-4.5
4,518,493	-				-3.0
4,518,493	-				-4.8
4,518,493	-				-2.8
4,518,493	-				-4.9
4,518,493	-				-4.0
4,518,636	-		SO4327	0.19	-4.9
4,518,692	-		SO4327	0.24	-5.5
4,518,898	-		SO4327	0.42	-1.4
4,518,928	+		SO4327	0.45	-3.8
4,518,936	-		SO4327	0.46	-2.8
4,518,993	-		SO4327	0.51	-4.0
4,519,006	+		SO4327	0.52	-2.6
4,519,009	-		SO4327	0.52	-1.6
4,519,106	-		SO4327	0.61	-1.8
4,519,137	+		SO4327	0.64	-4.7
4,519,212	+		SO4327	0.70	-3.8
4,519,220	-		SO4327	0.71	-0.6
4,519,252	+		SO4327	0.74	-2.6
4,519,277	+		SO4327	0.76	-3.4
4,519,292	+		SO4327	0.78	-2.8
4,519,300	-		SO4327	0.78	-3.6
4,519,323	+		SO4327	0.80	-1.7
4,519,356	+		SO4327	0.83	-0.6
4,519,356	+		SO4327	0.83	-2.6
4,519,356	+		SO4327	0.83	-3.7
4,519,364	-		SO4327	0.84	-4.4
4,519,364	-		SO4327	0.84	-2.4
4,519,364	-		SO4327	0.84	-3.5
4,519,392	-		SO4327	0.87	-6.7