Strain Fitness in Shewanella oneidensis MR-1 around SO3512

Experiment: Benzalkonium Chloride 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.004 mg/ml
3,663,795	-				-0.5
3,663,843	-				+0.7
3,664,037	-				-0.0
3,664,065	+				-0.1
3,664,104	-				-1.0
3,664,169	+				+0.7
3,664,277	-				+0.1
3,664,352	-				+0.2
3,664,425	-		SO3511	0.26	+0.5
3,664,431	+		SO3511	0.29	+0.6
3,664,453	+		SO3511	0.39	+0.8
3,664,453	+		SO3511	0.39	+0.0
3,664,453	+		SO3511	0.39	+0.4
3,664,453	+		SO3511	0.39	-0.3
3,664,475	-		SO3511	0.48	+0.2
3,664,475	-		SO3511	0.48	-0.4
3,664,486	+		SO3511	0.53	+0.0
3,664,491	+		SO3511	0.56	-0.6
3,664,494	-		SO3511	0.57	+0.5
3,664,505	-		SO3511	0.62	-0.5
3,664,525	+		SO3511	0.71	+0.3
3,664,541	+		SO3511	0.78	-0.5
3,664,541	+		SO3511	0.78	-0.7
3,664,541	+		SO3511	0.78	+0.2
3,664,541	+		SO3511	0.78	-0.3
3,664,541	+		SO3511	0.78	+0.4
3,664,544	-		SO3511	0.79	-1.4
3,664,549	-		SO3511	0.81	+1.5
3,664,549	-		SO3511	0.81	+0.9
3,664,549	-		SO3511	0.81	+1.2
3,664,549	-		SO3511	0.81	+0.2
3,664,549	-		SO3511	0.81	-0.1
3,664,549	-		SO3511	0.81	+0.4
3,664,551	+		SO3511	0.82	-0.2
3,664,551	+		SO3511	0.82	-0.2
3,664,551	+		SO3511	0.82	-0.3
3,664,551	+		SO3511	0.82	+0.6
3,664,556	+		SO3511	0.84	+0.7
3,664,559	-		SO3511	0.86	+1.1
3,664,559	-		SO3511	0.86	+0.0
3,664,597	-				-1.8
3,664,629	-				-0.2
3,664,636	-				-0.8
3,664,660	-				-0.2
3,664,668	+				+0.4
3,664,670	+				-0.2
3,664,678	-				+0.1
3,664,678	-				+0.0
3,664,688	+				-0.7
3,664,706	-				+0.7
3,664,770	+				-0.2
3,664,784	+				+0.2
3,664,784	+				+0.5
3,664,784	+				-0.1
3,664,784	-				-1.3
3,664,795	+				-6.0
3,664,837	-		SO3512	0.13	+0.4
3,664,847	+		SO3512	0.14	-0.3
3,664,847	-		SO3512	0.14	+0.5
3,664,851	-		SO3512	0.15	+0.6
3,664,853	+		SO3512	0.15	+0.9
3,664,855	+		SO3512	0.15	+1.5
3,664,855	+		SO3512	0.15	-0.2
3,664,863	+		SO3512	0.16	+0.0
3,664,867	+		SO3512	0.17	+1.8
3,664,871	-		SO3512	0.18	-0.1
3,664,872	+		SO3512	0.18	-0.6
3,664,875	-		SO3512	0.18	-0.0
3,664,877	+		SO3512	0.18	-1.3
3,664,877	+		SO3512	0.18	+0.2
3,664,885	-		SO3512	0.20	+1.1
3,664,895	+		SO3512	0.21	-0.4
3,664,909	-		SO3512	0.23	+0.8
3,664,911	+		SO3512	0.23	+1.0
3,664,912	+		SO3512	0.23	-0.6
3,664,917	+		SO3512	0.24	+0.3
3,664,922	-		SO3512	0.25	+0.2
3,664,926	+		SO3512	0.26	+0.5
3,664,926	+		SO3512	0.26	+0.5
3,664,926	+		SO3512	0.26	-0.7
3,664,926	+		SO3512	0.26	+0.5
3,664,926	+		SO3512	0.26	+0.1
3,664,926	+		SO3512	0.26	-0.2
3,664,926	+		SO3512	0.26	-0.3
3,664,926	+		SO3512	0.26	-1.6
3,664,926	+		SO3512	0.26	+0.7
3,664,926	+		SO3512	0.26	+0.5
3,664,926	+		SO3512	0.26	-0.3
3,664,926	+		SO3512	0.26	+0.2
3,664,926	+		SO3512	0.26	+2.1
3,664,926	+		SO3512	0.26	-0.1
3,664,926	+		SO3512	0.26	-0.3
3,664,926	+		SO3512	0.26	+1.0
3,664,926	+		SO3512	0.26	+0.2
3,664,926	+		SO3512	0.26	-0.3
3,664,926	+		SO3512	0.26	+0.1
3,664,926	+		SO3512	0.26	-0.1
3,664,926	+		SO3512	0.26	+0.5
3,664,926	+		SO3512	0.26	+1.0
3,664,926	+		SO3512	0.26	+0.5
3,664,926	+		SO3512	0.26	-0.8
3,664,934	-		SO3512	0.27	+1.6
3,664,934	-		SO3512	0.27	-0.3
3,664,934	-		SO3512	0.27	+0.2
3,664,934	-		SO3512	0.27	+0.3
3,664,934	-		SO3512	0.27	+1.5
3,664,934	-		SO3512	0.27	+0.2
3,664,934	-		SO3512	0.27	+1.2
3,664,934	-		SO3512	0.27	+0.4
3,664,934	-		SO3512	0.27	+1.1
3,664,934	-		SO3512	0.27	-0.1
3,664,934	-		SO3512	0.27	-0.3
3,664,934	-		SO3512	0.27	+1.3
3,664,934	-		SO3512	0.27	+0.4
3,664,934	-		SO3512	0.27	-0.2
3,664,934	-		SO3512	0.27	+0.3
3,664,934	-		SO3512	0.27	+0.4
3,664,934	-		SO3512	0.27	+0.1
3,664,934	-		SO3512	0.27	+1.2
3,664,942	+		SO3512	0.28	+0.4
3,664,950	+		SO3512	0.29	+0.0
3,664,950	+		SO3512	0.29	-0.3
3,664,950	+		SO3512	0.29	-0.7
3,664,950	+		SO3512	0.29	-0.2
3,664,950	-		SO3512	0.29	+0.6
3,664,958	-		SO3512	0.30	+2.7
3,664,958	-		SO3512	0.30	-0.3
3,664,958	-		SO3512	0.30	-0.8
3,664,958	-		SO3512	0.30	+1.0
3,664,958	-		SO3512	0.30	-0.8
3,664,958	-		SO3512	0.30	+0.8
3,664,958	-		SO3512	0.30	+1.7
3,664,958	-		SO3512	0.30	-0.6
3,664,958	-		SO3512	0.30	+0.2
3,664,958	-		SO3512	0.30	+0.1
3,664,958	-		SO3512	0.30	+0.4
3,664,958	-		SO3512	0.30	-0.1
3,664,958	-		SO3512	0.30	+0.4
3,664,968	-		SO3512	0.32	+0.7
3,664,986	-		SO3512	0.34	-1.0
3,664,992	+		SO3512	0.35	-0.0
3,665,005	-		SO3512	0.37	+0.2
3,665,045	-		SO3512	0.43	+1.2
3,665,077	+		SO3512	0.47	-0.2
3,665,079	+		SO3512	0.48	+0.5
3,665,085	-		SO3512	0.49	-0.1
3,665,085	-		SO3512	0.49	+0.6
3,665,126	+		SO3512	0.54	+0.5
3,665,126	+		SO3512	0.54	+0.3
3,665,127	+		SO3512	0.55	+0.4
3,665,134	-		SO3512	0.56	+0.3
3,665,134	-		SO3512	0.56	+1.0
3,665,134	-		SO3512	0.56	+0.3
3,665,134	-		SO3512	0.56	-0.1
3,665,141	+		SO3512	0.57	+0.2
3,665,141	+		SO3512	0.57	-0.4
3,665,144	-		SO3512	0.57	+0.4
3,665,146	+		SO3512	0.57	+0.9
3,665,149	-		SO3512	0.58	+0.3
3,665,149	-		SO3512	0.58	+0.2
3,665,154	-		SO3512	0.59	+0.1
3,665,167	-		SO3512	0.60	-0.6
3,665,170	+		SO3512	0.61	-1.6
3,665,173	-		SO3512	0.61	+0.4
3,665,180	+		SO3512	0.62	-1.2
3,665,180	+		SO3512	0.62	+0.0
3,665,180	+		SO3512	0.62	+0.5
3,665,185	+		SO3512	0.63	+0.8
3,665,185	+		SO3512	0.63	+1.2
3,665,185	+		SO3512	0.63	-0.3
3,665,185	+		SO3512	0.63	-0.4
3,665,185	+		SO3512	0.63	-0.1
3,665,188	-		SO3512	0.63	-0.3
3,665,188	-		SO3512	0.63	-0.5
3,665,193	-		SO3512	0.64	+0.2
3,665,207	+		SO3512	0.66	+0.6
3,665,217	+		SO3512	0.68	+0.1
3,665,217	+		SO3512	0.68	-0.8
3,665,233	-		SO3512	0.70	-1.7
3,665,237	+		SO3512	0.71	+0.1
3,665,240	-		SO3512	0.71	+0.7
3,665,240	-		SO3512	0.71	-0.7
3,665,241	+		SO3512	0.71	-0.0
3,665,246	-		SO3512	0.72	-0.9
3,665,248	-		SO3512	0.72	+1.2
3,665,253	-		SO3512	0.73	-0.3
3,665,255	+		SO3512	0.73	-0.1
3,665,260	+		SO3512	0.74	+0.2
3,665,260	+		SO3512	0.74	-0.4
3,665,260	+		SO3512	0.74	+0.8
3,665,305	+		SO3512	0.80	+0.4
3,665,310	+		SO3512	0.81	+0.6
3,665,315	+		SO3512	0.82	-1.7
3,665,315	+		SO3512	0.82	-0.3
3,665,317	+		SO3512	0.82	+0.1
3,665,317	+		SO3512	0.82	+0.3
3,665,323	+		SO3512	0.83	+0.3
3,665,323	+		SO3512	0.83	+0.5
3,665,323	+		SO3512	0.83	-0.0
3,665,323	+		SO3512	0.83	-0.1
3,665,323	+		SO3512	0.83	+0.6
3,665,323	+		SO3512	0.83	+0.6
3,665,323	+		SO3512	0.83	+0.2
3,665,323	+		SO3512	0.83	+0.0
3,665,323	-		SO3512	0.83	+1.4
3,665,323	-		SO3512	0.83	-0.6
3,665,323	-		SO3512	0.83	+0.2
3,665,325	-		SO3512	0.83	+2.4
3,665,328	-		SO3512	0.84	-0.4
3,665,331	+		SO3512	0.84	-0.6
3,665,331	-		SO3512	0.84	-0.1
3,665,331	-		SO3512	0.84	+0.1
3,665,331	-		SO3512	0.84	+0.4
3,665,332	+		SO3512	0.84	-1.8
3,665,337	-		SO3512	0.85	-0.6
3,665,339	+		SO3512	0.85	-0.9
3,665,342	+		SO3512	0.86	+0.5
3,665,344	+		SO3512	0.86	+0.3
3,665,344	+		SO3512	0.86	+0.3
3,665,344	+		SO3512	0.86	-0.7
3,665,344	+		SO3512	0.86	-0.3
3,665,344	+		SO3512	0.86	+0.3
3,665,344	+		SO3512	0.86	+0.7
3,665,344	+		SO3512	0.86	+0.9
3,665,344	+		SO3512	0.86	+0.3
3,665,345	-		SO3512	0.86	+0.0
3,665,345	-		SO3512	0.86	+0.2
3,665,352	-		SO3512	0.87	+0.0
3,665,352	-		SO3512	0.87	-0.1
3,665,352	-		SO3512	0.87	+0.8
3,665,352	-		SO3512	0.87	-0.9
3,665,352	-		SO3512	0.87	-1.6
3,665,352	-		SO3512	0.87	+0.3
3,665,352	-		SO3512	0.87	-0.3
3,665,352	-		SO3512	0.87	+0.7
3,665,352	-		SO3512	0.87	-0.1
3,665,352	-		SO3512	0.87	-0.4
3,665,352	-		SO3512	0.87	+0.1
3,665,352	-		SO3512	0.87	+0.3
3,665,352	-		SO3512	0.87	-0.3
3,665,355	-		SO3512	0.88	+0.6
3,665,364	+		SO3512	0.89	+0.4
3,665,374	+				-0.2
3,665,413	+				+0.2
3,665,459	+				-0.3
3,665,459	+				+0.2
3,665,459	+				+0.7
3,665,459	+				-1.2
3,665,466	+				-0.8
3,665,467	-				+1.7
3,665,467	-				+0.0
3,665,467	-				-0.0
3,665,491	-				+1.3
3,665,497	+				+0.1
3,665,523	+				+0.6
3,665,525	+				-0.7
3,665,529	+				+0.2
3,665,530	+				-2.3
3,665,531	-				-0.5
3,665,536	+				+0.4
3,665,537	-				-1.1
3,665,537	-				+0.1
3,665,538	-				+0.2
3,665,544	+				-0.8
3,665,544	+				+0.1
3,665,544	+				-1.7
3,665,552	-				+0.3
3,665,552	-				-2.4
3,665,552	-				+1.1
3,665,553	+				+1.5
3,665,553	+				+0.5
3,665,553	-				-0.8
3,665,561	-				-0.4
3,665,566	-				+0.5
3,665,568	-				+0.1
3,665,574	+				+1.0
3,665,607	+				+0.8
3,665,608	+				+0.5
3,665,609	-				-0.2
3,665,609	-				-0.4
3,665,609	-				+0.1
3,665,663	+		SO3513	0.12	+0.2
3,665,668	+		SO3513	0.13	+1.0
3,665,670	+		SO3513	0.13	+0.8
3,665,672	-		SO3513	0.13	+0.1
3,665,678	+		SO3513	0.13	-0.2
3,665,678	+		SO3513	0.13	-0.5
3,665,678	+		SO3513	0.13	-0.4
3,665,678	-		SO3513	0.13	+0.3
3,665,685	-		SO3513	0.14	-1.3
3,665,686	-		SO3513	0.14	+0.4
3,665,686	-		SO3513	0.14	-0.2
3,665,686	-		SO3513	0.14	-0.9
3,665,686	-		SO3513	0.14	+0.2
3,665,700	-		SO3513	0.15	+0.2
3,665,700	-		SO3513	0.15	-0.3
3,665,700	-		SO3513	0.15	+0.2
3,665,705	+		SO3513	0.15	+0.5
3,665,707	-		SO3513	0.15	+2.9
3,665,710	-		SO3513	0.15	+0.3
3,665,711	+		SO3513	0.15	-0.1
3,665,712	-		SO3513	0.16	+0.0
3,665,718	-		SO3513	0.16	+1.0
3,665,719	-		SO3513	0.16	-0.3
3,665,727	+		SO3513	0.17	+0.5
3,665,736	-		SO3513	0.17	-0.1
3,665,749	-		SO3513	0.18	-0.7
3,665,750	+		SO3513	0.18	-0.5
3,665,758	-		SO3513	0.19	+0.8
3,665,758	-		SO3513	0.19	+0.1
3,665,758	-		SO3513	0.19	-0.2
3,665,763	-		SO3513	0.19	-0.1
3,665,780	-		SO3513	0.20	+0.2
3,665,800	+		SO3513	0.21	-0.8
3,665,800	+		SO3513	0.21	+0.7
3,665,803	-		SO3513	0.22	+2.2
3,665,807	-		SO3513	0.22	-0.7
3,665,808	-		SO3513	0.22	+0.8
3,665,815	+		SO3513	0.22	+0.1
3,665,842	+		SO3513	0.24	+0.7
3,665,849	+		SO3513	0.25	+0.2
3,665,849	+		SO3513	0.25	-1.5
3,665,849	+		SO3513	0.25	+0.4
3,665,849	+		SO3513	0.25	+0.4
3,665,849	+		SO3513	0.25	-0.0
3,665,849	+		SO3513	0.25	-0.1
3,665,849	+		SO3513	0.25	-0.2
3,665,854	-		SO3513	0.25	+2.3
3,665,857	-		SO3513	0.25	+0.2
3,665,857	-		SO3513	0.25	-0.0
3,665,857	-		SO3513	0.25	+1.0
3,665,857	-		SO3513	0.25	+0.6
3,665,857	-		SO3513	0.25	-0.6
3,665,857	-		SO3513	0.25	+0.5
3,665,857	-		SO3513	0.25	-0.3
3,665,857	-		SO3513	0.25	+0.1
3,665,857	-		SO3513	0.25	+0.1
3,665,859	+		SO3513	0.25	+0.9
3,665,859	+		SO3513	0.25	-0.8
3,665,862	-		SO3513	0.25	+0.2
3,665,862	-		SO3513	0.25	+0.4
3,665,867	-		SO3513	0.26	+0.2
3,665,867	-		SO3513	0.26	-0.4
3,665,867	-		SO3513	0.26	+0.5
3,665,867	-		SO3513	0.26	-1.6
3,665,877	-		SO3513	0.26	-0.3
3,665,914	+		SO3513	0.29	+0.0
3,665,922	-		SO3513	0.29	+0.1
3,665,922	-		SO3513	0.29	+1.1
3,665,979	-		SO3513	0.33	-1.5
3,665,986	-		SO3513	0.34	-0.3
3,665,988	+		SO3513	0.34	-0.6
3,665,988	+		SO3513	0.34	+0.4
3,665,988	+		SO3513	0.34	-0.1
3,665,988	+		SO3513	0.34	+0.0
3,665,988	+		SO3513	0.34	+0.9
3,665,993	+		SO3513	0.34	+1.1
3,665,994	+		SO3513	0.34	-1.2
3,665,996	-		SO3513	0.34	-0.5
3,665,996	-		SO3513	0.34	-0.5
3,665,996	-		SO3513	0.34	-0.3
3,665,999	+		SO3513	0.34	+1.9
3,666,000	+		SO3513	0.34	-1.3
3,666,000	+		SO3513	0.34	-0.9
3,666,000	+		SO3513	0.34	+0.3
3,666,000	+		SO3513	0.34	+0.6
3,666,000	+		SO3513	0.34	+0.5
3,666,000	+		SO3513	0.34	+0.3
3,666,000	+		SO3513	0.34	+1.2
3,666,000	+		SO3513	0.34	-0.1
3,666,008	-		SO3513	0.35	+0.9
3,666,008	-		SO3513	0.35	+0.6
3,666,008	-		SO3513	0.35	+0.8
3,666,008	-		SO3513	0.35	+0.4
3,666,008	-		SO3513	0.35	+0.3
3,666,008	-		SO3513	0.35	+0.5
3,666,008	-		SO3513	0.35	+0.7
3,666,008	-		SO3513	0.35	+1.5
3,666,008	-		SO3513	0.35	+0.7
3,666,008	-		SO3513	0.35	+0.5
3,666,050	+		SO3513	0.38	-0.3
3,666,057	-		SO3513	0.38	-1.2
3,666,083	+		SO3513	0.40	-0.6
3,666,118	+		SO3513	0.42	-1.5
3,666,118	+		SO3513	0.42	-0.3
3,666,125	-		SO3513	0.43	-0.9
3,666,126	-		SO3513	0.43	+0.9
3,666,126	-		SO3513	0.43	-0.2
3,666,126	-		SO3513	0.43	-0.5
3,666,126	-		SO3513	0.43	-0.9
3,666,126	-		SO3513	0.43	-0.2
3,666,126	-		SO3513	0.43	+0.4
3,666,158	-		SO3513	0.45	-1.1
3,666,158	-		SO3513	0.45	-0.4
3,666,160	+		SO3513	0.45	-0.3
3,666,171	-		SO3513	0.46	-0.0
3,666,173	+		SO3513	0.46	-0.6
3,666,173	+		SO3513	0.46	-0.5
3,666,173	+		SO3513	0.46	-0.5
3,666,181	-		SO3513	0.46	+0.7
3,666,181	-		SO3513	0.46	+0.2
3,666,181	-		SO3513	0.46	+0.1
3,666,181	-		SO3513	0.46	-0.2
3,666,181	-		SO3513	0.46	-0.5
3,666,181	-		SO3513	0.46	+0.1
3,666,187	+		SO3513	0.47	+0.3
3,666,188	+		SO3513	0.47	-0.6
3,666,195	-		SO3513	0.47	-1.3
3,666,209	-		SO3513	0.48	+1.8
3,666,239	+		SO3513	0.50	-0.8
3,666,247	-		SO3513	0.51	+0.0
3,666,251	+		SO3513	0.51	-0.3
3,666,265	-		SO3513	0.52	+0.6
3,666,296	+		SO3513	0.54	+1.1
3,666,382	+		SO3513	0.60	-0.1
3,666,390	-		SO3513	0.60	-0.2
3,666,392	+		SO3513	0.60	+0.6
3,666,397	+		SO3513	0.60	+1.3
3,666,400	-		SO3513	0.61	-0.4
3,666,400	-		SO3513	0.61	-0.6
3,666,401	+		SO3513	0.61	-0.8
3,666,401	+		SO3513	0.61	-0.2
3,666,401	+		SO3513	0.61	-0.8
3,666,401	+		SO3513	0.61	-0.4
3,666,401	+		SO3513	0.61	-0.9
3,666,401	+		SO3513	0.61	-1.0
3,666,401	+		SO3513	0.61	+0.6
3,666,401	+		SO3513	0.61	-0.8
3,666,401	+		SO3513	0.61	-0.2
3,666,401	+		SO3513	0.61	+0.3
3,666,405	-		SO3513	0.61	-0.6
3,666,409	-		SO3513	0.61	+0.7
3,666,409	-		SO3513	0.61	-0.3
3,666,409	-		SO3513	0.61	-0.5
3,666,409	-		SO3513	0.61	-0.5
3,666,420	+		SO3513	0.62	-0.5
3,666,425	+		SO3513	0.62	-3.4
3,666,427	+		SO3513	0.62	+0.4
3,666,427	+		SO3513	0.62	-0.8
3,666,427	+		SO3513	0.62	-0.6
3,666,427	+		SO3513	0.62	+1.0
3,666,433	-		SO3513	0.63	+0.2
3,666,433	-		SO3513	0.63	+0.1
3,666,435	-		SO3513	0.63	-0.3
3,666,435	-		SO3513	0.63	+0.6
3,666,437	+		SO3513	0.63	-1.4
3,666,438	+		SO3513	0.63	+0.5
3,666,438	+		SO3513	0.63	-1.7