Strain Fitness in Shewanella oneidensis MR-1 around SO3294

Experiment: Benzalkonium Chloride 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.004 mg/ml
3,437,967	+				+1.4
3,438,044	+	guaB	SO3293	0.46	-3.0
3,438,117	+	guaB	SO3293	0.51	-3.2
3,438,125	-	guaB	SO3293	0.52	-1.7
3,438,148	-	guaB	SO3293	0.53	-1.6
3,438,188	+	guaB	SO3293	0.56	-0.2
3,438,236	+				-0.9
3,438,244	-	guaB	SO3293	0.60	-1.0
3,438,248	+	guaB	SO3293	0.60	-1.4
3,438,256	-	guaB	SO3293	0.60	-1.7
3,438,429	-	guaB	SO3293	0.72	+0.1
3,438,532	-	guaB	SO3293	0.79	+0.1
3,438,731	+				-1.4
3,438,766	-				-1.4
3,438,887	+				+0.1
3,438,887	+				-0.7
3,438,887	+				-0.2
3,438,895	-				+0.3
3,438,895	-				+0.3
3,438,895	-				-0.7
3,438,996	+				-0.3
3,439,082	+				-0.6
3,439,167	+	xseA	SO3294	0.16	-0.7
3,439,277	+	xseA	SO3294	0.24	-0.2
3,439,283	-	xseA	SO3294	0.24	-0.4
3,439,285	-	xseA	SO3294	0.24	+0.3
3,439,392	-	xseA	SO3294	0.32	-0.8
3,439,403	-	xseA	SO3294	0.33	-0.4
3,439,429	-	xseA	SO3294	0.35	+0.0
3,439,438	-	xseA	SO3294	0.36	-0.8
3,439,566	-	xseA	SO3294	0.45	-1.6
3,439,671	-	xseA	SO3294	0.53	+1.1
3,439,779	-	xseA	SO3294	0.61	-1.8
3,439,779	-	xseA	SO3294	0.61	-0.9
3,439,791	-	xseA	SO3294	0.62	+0.0
3,439,801	-	xseA	SO3294	0.63	-0.8
3,439,830	+	xseA	SO3294	0.65	-1.0
3,439,830	+	xseA	SO3294	0.65	-0.4
3,439,937	-	xseA	SO3294	0.73	-0.9
3,439,937	-	xseA	SO3294	0.73	+1.0
3,439,961	+	xseA	SO3294	0.75	+2.4
3,440,002	-	xseA	SO3294	0.78	+0.7
3,440,087	+	xseA	SO3294	0.84	-0.3
3,440,090	-	xseA	SO3294	0.85	-0.2
3,440,095	-	xseA	SO3294	0.85	+0.4
3,440,130	+	xseA	SO3294	0.88	-1.1
3,440,168	-				+0.7
3,440,183	-				-0.4
3,440,233	-				-0.4
3,440,251	-				-1.7
3,440,304	-				+0.2
3,440,353	-				+2.2