Strain Fitness in Shewanella oneidensis MR-1 around SO2759

Experiment: Benzalkonium Chloride 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.004 mg/ml
2,881,036	+		SO2758	0.57	-0.7
2,881,335	+		SO2758	0.78	+0.6
2,881,402	+		SO2758	0.83	-0.7
2,881,598	+				-0.4
2,881,606	-				-0.2
2,881,859	+				+0.1
2,881,867	-				-0.8
2,881,867	-				-0.3
2,881,873	+				+0.4
2,881,873	+				-0.6
2,881,873	+				+1.3
2,881,873	+				-0.2
2,881,881	-				-0.8
2,881,881	-				+0.1
2,881,881	-				-0.1
2,881,881	-				+0.1
2,881,914	+	upp	SO2759	0.14	+1.1
2,881,914	+	upp	SO2759	0.14	+0.7
2,881,914	+	upp	SO2759	0.14	+0.6
2,881,969	-	upp	SO2759	0.23	-0.2
2,882,125	+	upp	SO2759	0.48	+0.2
2,882,133	-	upp	SO2759	0.49	+0.4
2,882,133	-	upp	SO2759	0.49	+0.4
2,882,133	-	upp	SO2759	0.49	+0.5
2,882,133	-	upp	SO2759	0.49	+1.2
2,882,207	+	upp	SO2759	0.61	+0.5
2,882,215	-	upp	SO2759	0.62	+0.8
2,882,250	+	upp	SO2759	0.68	+0.7
2,882,392	-				+0.0
2,882,439	-				+0.7
2,882,640	-				-0.2
2,882,787	+				+0.1
2,882,803	-				+1.1
2,882,854	+				+0.6
2,882,862	-				+0.0
2,882,883	+	purM	SO2760	0.12	-0.4
2,882,976	+	purM	SO2760	0.20	-0.4
2,883,151	-	purM	SO2760	0.37	+0.3
2,883,244	-	purM	SO2760	0.46	+0.6
2,883,244	-	purM	SO2760	0.46	+0.3