Strain Fitness in Shewanella oneidensis MR-1 around SO2347

Experiment: Benzalkonium Chloride 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.004 mg/ml
2,454,289	-		SO2346	0.30	-0.3
2,454,300	+		SO2346	0.31	-0.3
2,454,300	+		SO2346	0.31	-0.2
2,454,308	-		SO2346	0.32	-0.6
2,454,309	+		SO2346	0.32	+0.2
2,454,361	+		SO2346	0.38	-0.6
2,454,369	-		SO2346	0.39	-0.3
2,454,369	-		SO2346	0.39	+0.5
2,454,411	-		SO2346	0.43	-0.1
2,454,591	+		SO2346	0.64	-1.1
2,454,606	+		SO2346	0.66	+0.6
2,454,639	+		SO2346	0.69	-0.3
2,454,639	+		SO2346	0.69	+0.5
2,454,647	-		SO2346	0.70	+1.2
2,454,652	-		SO2346	0.71	-2.4
2,454,657	-		SO2346	0.71	+0.2
2,454,680	+		SO2346	0.74	-0.6
2,454,690	+		SO2346	0.75	+0.1
2,454,719	-		SO2346	0.78	+1.0
2,454,765	+		SO2346	0.84	-0.2
2,454,765	+		SO2346	0.84	-1.1
2,455,062	+				-2.1
2,455,107	+				-0.3
2,455,190	+				-2.2
2,455,340	-	gapA-3	SO2347	0.16	-2.6
2,455,354	+	gapA-3	SO2347	0.17	-0.7
2,455,362	-	gapA-3	SO2347	0.17	-1.7
2,455,400	-	gapA-3	SO2347	0.20	-2.8
2,455,833	+	gapA-3	SO2347	0.50	-1.7
2,455,839	+	gapA-3	SO2347	0.51	-2.3
2,456,000	+	gapA-3	SO2347	0.62	+0.3
2,456,065	-	gapA-3	SO2347	0.66	-2.5
2,456,106	-	gapA-3	SO2347	0.69	-1.3
2,456,106	-	gapA-3	SO2347	0.69	-1.1
2,456,124	+	gapA-3	SO2347	0.71	-1.7
2,456,703	+				+0.3
2,456,781	+				+0.0
2,457,364	+				-0.1
2,457,364	+				+0.1
2,457,443	+				-0.1
2,457,451	-				+1.3