Strain Fitness in Shewanella oneidensis MR-1 around SO2341

Experiment: Benzalkonium Chloride 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.004 mg/ml
2,447,675	+		SO2340	0.12	-4.3
2,447,683	-		SO2340	0.13	-4.5
2,447,731	+		SO2340	0.18	-2.3
2,447,739	-		SO2340	0.19	-3.8
2,447,773	+		SO2340	0.22	-5.5
2,447,870	-		SO2340	0.32	-3.9
2,447,876	+		SO2340	0.33	-2.4
2,447,876	+		SO2340	0.33	-3.1
2,447,884	-		SO2340	0.34	-2.6
2,447,891	+		SO2340	0.34	-4.1
2,447,899	-		SO2340	0.35	-2.3
2,447,937	+		SO2340	0.39	-4.2
2,448,005	+		SO2340	0.46	-2.6
2,448,008	-		SO2340	0.46	-4.6
2,448,135	+		SO2340	0.59	-1.9
2,448,158	-		SO2340	0.62	-5.1
2,448,160	+		SO2340	0.62	-4.8
2,448,160	+		SO2340	0.62	-4.4
2,448,160	+		SO2340	0.62	-3.8
2,448,160	+		SO2340	0.62	-3.0
2,448,168	-		SO2340	0.63	-5.5
2,448,168	-		SO2340	0.63	-2.7
2,448,296	-		SO2340	0.76	-2.1
2,448,418	+		SO2340	0.88	-1.9
2,448,664	+				-4.5
2,448,764	-		SO2341	0.14	-1.4
2,448,838	+		SO2341	0.18	-2.6
2,449,005	-		SO2341	0.29	-3.1
2,449,005	-		SO2341	0.29	-3.5
2,449,005	-		SO2341	0.29	-2.4
2,449,019	-		SO2341	0.30	+0.3
2,449,059	-		SO2341	0.32	-2.9
2,449,102	+		SO2341	0.35	-2.6
2,449,221	-		SO2341	0.42	-2.7
2,449,221	-		SO2341	0.42	-1.7
2,449,316	-		SO2341	0.48	-3.8
2,449,349	-		SO2341	0.50	-4.4
2,449,404	-		SO2341	0.54	-1.5
2,449,419	-		SO2341	0.55	-3.3
2,449,485	+		SO2341	0.59	-1.7
2,449,652	+		SO2341	0.69	-3.4
2,449,982	-		SO2341	0.90	-1.7
2,450,042	+				-3.5
2,450,261	+				-0.9
2,450,261	+				-1.7
2,450,261	+				-2.3
2,450,261	+				+0.3
2,450,898	-	nadA	SO2342	0.57	-1.8
2,451,012	+	nadA	SO2342	0.68	-1.6
2,451,037	-	nadA	SO2342	0.70	-1.6
2,451,037	-	nadA	SO2342	0.70	-2.1