Strain Fitness in Shewanella oneidensis MR-1 around SO2339

Experiment: Benzalkonium Chloride 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.004 mg/ml
2,445,527	-	astE	SO2338	0.34	+0.7
2,445,534	+	astE	SO2338	0.35	-2.1
2,445,560	-	astE	SO2338	0.37	-1.1
2,445,730	-	astE	SO2338	0.54	-1.6
2,445,732	+	astE	SO2338	0.54	-2.1
2,445,839	+	astE	SO2338	0.64	-1.2
2,445,863	-	astE	SO2338	0.66	-3.5
2,445,934	+	astE	SO2338	0.73	-1.0
2,446,184	+				-0.9
2,446,818	-		SO2339	0.38	-2.6
2,446,862	+		SO2339	0.42	-3.7
2,446,868	-		SO2339	0.42	-2.7
2,446,968	-		SO2339	0.51	-1.5
2,447,090	-		SO2339	0.61	-3.2
2,447,151	+		SO2339	0.66	-0.8
2,447,160	-		SO2339	0.67	-2.9
2,447,196	+		SO2339	0.70	-3.5
2,447,420	-		SO2339	0.89	-4.9
2,447,675	+		SO2340	0.12	-4.3
2,447,683	-		SO2340	0.13	-4.5
2,447,731	+		SO2340	0.18	-2.3
2,447,739	-		SO2340	0.19	-3.8
2,447,773	+		SO2340	0.22	-5.5
2,447,870	-		SO2340	0.32	-3.9
2,447,876	+		SO2340	0.33	-2.4
2,447,876	+		SO2340	0.33	-3.1
2,447,884	-		SO2340	0.34	-2.6
2,447,891	+		SO2340	0.34	-4.1
2,447,899	-		SO2340	0.35	-2.3
2,447,937	+		SO2340	0.39	-4.2
2,448,005	+		SO2340	0.46	-2.6
2,448,008	-		SO2340	0.46	-4.6
2,448,135	+		SO2340	0.59	-1.9
2,448,158	-		SO2340	0.62	-5.1
2,448,160	+		SO2340	0.62	-4.8
2,448,160	+		SO2340	0.62	-4.4
2,448,160	+		SO2340	0.62	-3.8
2,448,160	+		SO2340	0.62	-3.0
2,448,168	-		SO2340	0.63	-5.5
2,448,168	-		SO2340	0.63	-2.7
2,448,296	-		SO2340	0.76	-2.1
2,448,418	+		SO2340	0.88	-1.9