Strain Fitness in Shewanella oneidensis MR-1 around SO2308
Experiment: Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Benzalkonium Chloride 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,419,526 | + | SO2306 | 0.89 | -1.2 | |
2,420,649 | - | -1.0 | |||
2,421,046 | - | SO2308 | 0.39 | +0.1 | |
2,421,190 | - | SO2308 | 0.50 | -0.5 | |
2,421,549 | + | SO2308 | 0.77 | +1.3 | |
2,421,612 | - | SO2308 | 0.82 | +1.0 | |
2,421,689 | + | SO2308 | 0.87 | -0.6 | |
2,421,699 | + | SO2308 | 0.88 | +0.9 | |
2,421,826 | + | -0.6 | |||
2,421,867 | - | -1.0 | |||
2,421,874 | - | +1.0 | |||
2,421,877 | + | -0.8 | |||
2,421,995 | + | crcB | SO2309 | 0.38 | +1.9 |
Or see this region's nucleotide sequence