Strain Fitness in Shewanella oneidensis MR-1 around SO2092

Experiment: Benzalkonium Chloride 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.004 mg/ml
2,187,313	+	hypD	SO2091	0.25	-1.3
2,187,313	+	hypD	SO2091	0.25	+0.3
2,187,313	+				+2.3
2,187,313	+	hypD	SO2091	0.25	-0.7
2,187,537	-	hypD	SO2091	0.44	+0.1
2,187,557	+	hypD	SO2091	0.46	-0.6
2,187,566	+	hypD	SO2091	0.47	+0.3
2,187,595	-	hypD	SO2091	0.49	+0.2
2,187,718	+	hypD	SO2091	0.60	-0.4
2,187,780	+	hypD	SO2091	0.66	+0.0
2,187,880	+	hypD	SO2091	0.74	-1.1
2,187,880	+	hypD	SO2091	0.74	+0.8
2,187,903	+	hypD	SO2091	0.76	-1.8
2,187,949	+	hypD	SO2091	0.80	+1.0
2,188,070	-				-0.2
2,188,075	+				-0.3
2,188,289	-	hypC	SO2092	0.22	-0.4
2,188,404	+	hypC	SO2092	0.69	-1.5
2,188,404	+	hypC	SO2092	0.69	-0.4
2,188,404	+	hypC	SO2092	0.69	-0.7
2,188,509	-				-0.2
2,188,853	+	hypB	SO2093	0.47	+0.1
2,188,861	-	hypB	SO2093	0.48	-0.6
2,188,861	-	hypB	SO2093	0.48	+2.1
2,188,954	+	hypB	SO2093	0.60	+0.1
2,188,975	+	hypB	SO2093	0.62	+0.9
2,188,996	+	hypB	SO2093	0.65	+0.4
2,189,004	-	hypB	SO2093	0.66	-0.6
2,189,060	-	hypB	SO2093	0.73	-0.1
2,189,079	+	hypB	SO2093	0.75	+0.3
2,189,079	+	hypB	SO2093	0.75	-0.6
2,189,158	-	hypB	SO2093	0.85	-2.2
2,189,472	-				+0.2