Strain Fitness in Shewanella oneidensis MR-1 around SO1821

Experiment: Benzalkonium Chloride 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.004 mg/ml
1,911,825	+	polB	SO1820	0.73	+0.2
1,911,948	+	polB	SO1820	0.78	+0.4
1,911,948	+	polB	SO1820	0.78	+0.4
1,911,948	+	polB	SO1820	0.78	-0.6
1,911,956	-	polB	SO1820	0.78	+1.4
1,911,957	+	polB	SO1820	0.78	+0.6
1,911,957	+	polB	SO1820	0.78	+0.0
1,911,965	-	polB	SO1820	0.79	+1.0
1,911,965	-	polB	SO1820	0.79	-1.4
1,912,234	-	polB	SO1820	0.90	-0.2
1,912,330	+				+0.7
1,912,330	+				-0.0
1,912,335	+				+0.9
1,912,335	+				+0.7
1,912,894	+		SO1821	0.16	-0.8
1,912,896	-		SO1821	0.16	-1.0
1,912,973	-		SO1821	0.23	-0.9
1,913,202	+		SO1821	0.42	+0.1
1,913,294	-		SO1821	0.50	-0.1
1,913,332	+		SO1821	0.53	-2.2
1,913,493	+		SO1821	0.66	-2.1
1,913,493	+		SO1821	0.66	-1.7
1,913,517	-		SO1821	0.68	-1.6
1,913,517	-		SO1821	0.68	-1.0
1,913,839	-				+0.1
1,913,884	+				+0.1
1,913,918	+				-2.0
1,914,377	-				+0.6
1,914,392	-				+0.4
1,914,397	+				+0.0
1,914,448	+				-0.1
1,914,448	+				-0.1
1,914,448	+				+0.3
1,914,468	-		SO1822	0.10	+0.9
1,914,491	+		SO1822	0.11	-2.2
1,914,802	+		SO1822	0.22	-0.3