Strain Fitness in Shewanella oneidensis MR-1 around SO1501

Experiment: Benzalkonium Chloride 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.004 mg/ml
1,572,654	-		SO1500	0.73	+0.1
1,572,735	-		SO1500	0.76	-0.1
1,572,750	+		SO1500	0.77	+0.8
1,572,784	-		SO1500	0.78	-0.0
1,572,789	+		SO1500	0.78	-0.0
1,572,791	-		SO1500	0.78	+0.9
1,572,800	-		SO1500	0.78	-1.2
1,572,813	+		SO1500	0.79	+0.2
1,572,864	+		SO1500	0.80	-0.8
1,572,918	+		SO1500	0.82	-0.7
1,572,926	+		SO1500	0.83	-0.3
1,572,980	+		SO1500	0.84	+0.4
1,573,007	-		SO1500	0.85	-2.4
1,573,031	+		SO1500	0.86	-1.0
1,573,095	-		SO1500	0.88	-0.3
1,573,328	+				+0.2
1,573,329	-				-0.2
1,573,336	-				-0.3
1,573,336	-				-0.2
1,573,353	+				+0.4
1,573,366	-				-0.3
1,573,442	+				+0.1
1,573,442	+				-1.4
1,573,444	+				+0.1
1,573,638	+				-0.2
1,573,674	+				-0.8
1,573,709	+				+0.2
1,573,771	+				+1.4
1,573,869	-		SO1501	0.16	+1.6
1,573,995	+		SO1501	0.25	+0.6
1,573,995	+		SO1501	0.25	-0.1
1,574,080	-		SO1501	0.31	-0.7
1,574,089	+		SO1501	0.32	-1.3
1,574,097	-		SO1501	0.33	-0.8
1,574,097	-		SO1501	0.33	-0.9
1,574,104	-		SO1501	0.33	-1.8
1,574,206	+		SO1501	0.40	-0.3
1,574,221	-		SO1501	0.42	-1.0
1,574,304	+		SO1501	0.48	-0.6
1,574,380	+		SO1501	0.53	-0.4
1,574,380	+		SO1501	0.53	-0.3
1,574,388	-		SO1501	0.54	-1.3
1,574,396	+		SO1501	0.54	-0.0
1,574,401	+		SO1501	0.55	-0.0
1,574,404	-		SO1501	0.55	-0.2
1,574,404	-		SO1501	0.55	-0.7
1,574,404	-		SO1501	0.55	-1.3
1,574,404	-		SO1501	0.55	-1.6
1,574,485	+		SO1501	0.61	-0.0
1,574,664	-		SO1501	0.74	-0.1
1,574,673	-		SO1501	0.75	-0.5
1,574,790	+		SO1501	0.83	-1.2
1,574,904	-				+0.3
1,575,046	+				-0.2
1,575,054	-				-0.2
1,575,064	-				-0.7
1,575,082	+				-0.6
1,575,089	+				+0.0
1,575,165	-				+3.0
1,575,294	+				+0.8
1,575,460	+		SO1502	0.24	-0.8
1,575,720	+		SO1502	0.48	+0.5
1,575,825	+		SO1502	0.58	+0.4
1,575,825	+		SO1502	0.58	+0.1
1,575,891	-		SO1502	0.64	+0.9
1,575,891	-		SO1502	0.64	+0.0
1,575,944	+		SO1502	0.68	-0.1
1,576,008	+		SO1502	0.74	-0.1